C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: high mobility group box 3 pseudogene 31
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000413333 HMGB3P31-001 ENSG00000231929 9606 - X:134961711-134962305 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastKidneyOvaryPlacentaTestisENST00000413333
Transcript ID Adipose Bladder Breast Kidney Ovary Placenta Testis
ENST00000413333 0.021±0.00 0.648±0.00 0.022±0.00 0.068±0.00 0.056±0.01 0.054±0.03 0.093±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000088874 Hmgb3-004 protein_coding Mus_musculus 0 667
ENSMUST00000114582 Hmgb3-003 protein_coding Mus_musculus 0 667
ENSMUST00000015361 Hmgb3-002 protein_coding Mus_musculus 0 667
ENSMUST00000072699 Hmgb3-001 protein_coding Mus_musculus 0 667
ENSMUST00000078030 Gm6104-201 protein_coding Mus_musculus 0 662
ENSMUST00000132145 Hmgb3-006 retained_intron Mus_musculus 0 634
ENSMUST00000123100 Hmgb3-005 protein_coding Mus_musculus 0 527
ENSMUST00000117806 Gm15576-001 processed_pseudogene Mus_musculus 0 468
ENSMUST00000176139 Gm18367-001 processed_pseudogene Mus_musculus 0 462

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