C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: cytochrome c, somatic
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000413447 CYCS-004 ENSG00000172115 9606 - 7:25123716-25125260 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LungENST00000413447
Transcript ID Lung
ENST00000413447 7.004±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002CR CIL_0002CR_0001 CGP 7:24796539-25125361
CIL_00099B CIL_00099B_0001 VISTA 7:25093990-25695067
CIL_00094X CIL_00094X_0001 VISTA 7:25107732-25710366
CIL_0002CQ CIL_0002CQ_0001 CGP 7:25120091-25180356

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005506 IEA iron ion binding
GO:0005739 IEA mitochondrion
GO:0009055 IEA electron carrier activity
GO:0020037 IEA heme binding
GO:0055114 IEA oxidation-reduction process
GO:0070469 IEA respiratory chain

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000077766 Cycs-002 retained_intron Mus_musculus 0 411
ENSMUST00000073080 Gm10053-201 protein_coding Mus_musculus 0 409
ENSMUST00000161401 Cycs-001 protein_coding Mus_musculus 0 409
ENSMUST00000118431 Gm13772-001 processed_pseudogene Mus_musculus 0 387
ENSMUST00000078246 Gm10108-201 protein_coding Mus_musculus 0 387
ENSMUST00000119355 Gm13252-001 processed_pseudogene Mus_musculus 0 327
ENSMUST00000120227 Gm14238-001 processed_pseudogene Mus_musculus 0 263

Loading