C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAD51 paralog C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000413590 RAD51C-011 ENSG00000108384 9606 + 17:58695148-58734229 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastHeartOvaryPlacentaTestisENST00000413590
Transcript ID Brain Breast Heart Ovary Placenta Testis
ENST00000413590 3.015±0.08 1.449±0.44 2.437±1.46 3.233±0.98 5.659±0.00 7.542±1.91

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000566 CIL_000566_0002 CGP 17:58692573-58985176

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005524 IEA ATP binding
GO:0006259 IEA DNA metabolic process
GO:0008094 IEA DNA-dependent ATPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000007790 Rad51c-001 protein_coding Mus_musculus 0 846
ENSMUST00000067692 Rad51c-002 protein_coding Mus_musculus 0 846
ENSMUST00000153073 Rad51c-004 nonsense_mediated_decay Mus_musculus 0 734
ENSMUST00000129400 Rad51c-003 nonsense_mediated_decay Mus_musculus 0 568

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