C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nucleoporin like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000413919 NUPL2-002 ENSG00000136243 9606 + 7:23182064-23200705 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastLungOvaryTestisENST00000413919
Transcript ID Adrenal Brain Breast Lung Ovary Testis
ENST00000413919 2.658±0.00 2.233±0.00 1.642±0.00 0.999±0.00 1.393±0.00 3.382±0.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00022N CIL_00022N_0001 CGP 7:23105758-23201011

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000049887 Nupl2-001 protein_coding Mus_musculus 0 549
ENSMUST00000115101 Nupl2-002 nonsense_mediated_decay Mus_musculus 0 357
ENSMUST00000147392 Nupl2-003 retained_intron Mus_musculus 5.99994e-41 172

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