C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: poly(A) polymerase gamma
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000414060 PAPOLG-003 ENSG00000115421 9606 + 2:60756266-60798466 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000414060
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000414060 1.008±0.00 0.680±0.00 0.860±0.05 0.918±0.00 1.583±0.00 0.962±0.00 0.849±0.00 0.602±0.00 1.618±0.00 0.606±0.13 1.458±0.29 0.789±0.36 3.751±0.54

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008GM CIL_0008GM_0001 VISTA 2:60234269-60835938
CIL_0009DA CIL_0009DA_0001 VISTA 2:60267677-60869129
CIL_0008PG CIL_0008PG_0001 VISTA 2:60327921-60929753

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004652 IEA polynucleotide adenylyltransferase activity
GO:0016779 IEA nucleotidyltransferase activity
GO:0043631 IEA RNA polyadenylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020513 Papolg-001 protein_coding Mus_musculus 0 2867
ENSMUST00000102863 Papolg-002 protein_coding Mus_musculus 0 1243
ENSMUST00000150711 Papolg-004 processed_transcript Mus_musculus 0 734
ENSMUST00000145013 Papolg-003 protein_coding Mus_musculus 0 669

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