C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: matrin 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000188359 Matr3-015 ENSMUSG00000037236 10090 + 18:35562146-35572490 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalLiverOvaryENSMUST00000188359
Transcript ID Adrenal Liver Ovary
ENSMUST00000188359 6.252±1.68 5.383±0.55 15.192±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005D0 CIL_0005D0_0002 CGP 18:35562146-35617186

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000361059 MATR3-201 protein_coding Homo_sapiens 0 1072
ENST00000394800 MATR3-001 protein_coding Homo_sapiens 0 1075
ENST00000394805 MATR3-002 protein_coding Homo_sapiens 0 1075
ENST00000415279 RP11-90H3.1-001 processed_pseudogene Homo_sapiens 0 706
ENST00000502394 MATR3-026 protein_coding Homo_sapiens 0 795
ENST00000502929 MATR3-003 protein_coding Homo_sapiens 0 1075
ENST00000503340 MATR3-044 protein_coding Homo_sapiens 0 736
ENST00000504023 MATR3-045 protein_coding Homo_sapiens 0 682
ENST00000504045 MATR3-011 protein_coding Homo_sapiens 0 1158
ENST00000505016 MATR3-017 protein_coding Homo_sapiens 0 512
ENST00000508689 MATR3-032 protein_coding Homo_sapiens 0 689
ENST00000509990 MATR3-013 protein_coding Homo_sapiens 0 1072
ENST00000510056 MATR3-009 protein_coding Homo_sapiens 0 1075
ENST00000511378 MATR3-046 protein_coding Homo_sapiens 0 320
ENST00000512876 MATR3-028 protein_coding Homo_sapiens 1e-19 100
ENST00000513121 MATR3-031 retained_intron Homo_sapiens 6e-18 95
ENST00000513678 MATR3-035 protein_coding Homo_sapiens 1e-19 100
ENST00000514488 MATR3-043 protein_coding Homo_sapiens 0 802
ENST00000514694 MATR3-024 protein_coding Homo_sapiens 0 835
ENST00000618441 MATR3-202 protein_coding Homo_sapiens 0 1077
ENST00000620916 MATR3-203 protein_coding Homo_sapiens 0 196

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