C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 18 pseudogene 39
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000415349 KRT18P39-001 ENSG00000224791 9606 - 2:203764295-203765593 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonKidneyLiverOvaryPlacentaENST00000415349
Transcript ID Adrenal Breast Colon Kidney Liver Ovary Placenta
ENST00000415349 0.097±0.00 0.018±0.00 0.026±0.00 0.017±0.00 0.015±0.00 0.043±0.02 0.019±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000398 CIL_000398_0001 CGP 2:203706475-203873960

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023803 Krt18-201 protein_coding Mus_musculus 0 782
ENSMUST00000188261 RP24-79D2.1-001 processed_pseudogene Mus_musculus 0 444
ENSMUST00000038004 Krt25-001 protein_coding Mus_musculus 0.00000000002 75
ENSMUST00000107411 Krt15-001 protein_coding Mus_musculus 0.00000000002 75
ENSMUST00000080893 Krt17-001 protein_coding Mus_musculus 0.0000000008 69

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