C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 15
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000107411 Krt15-001 ENSMUSG00000054146 10090 - 11:100131758-100135928 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000107411
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000107411 0.392±0.27 303.951±7.76 4.901±0.13 11.621±9.19 0.216±0.08 2.031±1.42 2.075±0.48 0.188±0.19 20.476±18.97 1.443±1.22 0.273±0.13 2.090±2.79 0.782±0.62

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056U CIL_00056U_0011 CGP 11:100117327-100135928
CIL_00056U CIL_00056U_0017 CGP 11:100131758-100148665

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005882 IEA intermediate filament
GO:0070062 IEA extracellular vesicular exosome
GO:0097110 IEA scaffold protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000167586 KRT14-001 protein_coding Homo_sapiens 0 603
ENST00000246635 KRT13-001 protein_coding Homo_sapiens 0 1020
ENST00000254043 KRT15-001 protein_coding Homo_sapiens 0 1458
ENST00000300992 KRT17P2-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 446
ENST00000301653 KRT16-001 protein_coding Homo_sapiens 0 584
ENST00000301656 KRT27-001 protein_coding Homo_sapiens 8e-31 139
ENST00000311208 KRT17-001 protein_coding Homo_sapiens 0 545
ENST00000312150 KRT25-001 protein_coding Homo_sapiens 8e-31 139
ENST00000326333 KRT17P2-002 processed_transcript Homo_sapiens 0 246
ENST00000336861 KRT13-002 protein_coding Homo_sapiens 0 1016
ENST00000361566 KRT19-001 protein_coding Homo_sapiens 0 466
ENST00000393974 KRT15-004 protein_coding Homo_sapiens 0 883
ENST00000393976 KRT15-007 protein_coding Homo_sapiens 0 1458
ENST00000399211 KRT17P1-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 472
ENST00000414673 KRT16P2-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 457
ENST00000415349 KRT18P39-001 processed_pseudogene Homo_sapiens 0.00000000002 75
ENST00000417510 KRT16P6-002 processed_transcript Homo_sapiens 0 353
ENST00000420566 KRT17P3-001 unprocessed_pseudogene Homo_sapiens 0 501
ENST00000425692 KRT16P6-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 484
ENST00000427733 KRT18P27-001 processed_pseudogene Homo_sapiens 0.0000001 62
ENST00000436075 KRT18P5-001 processed_pseudogene Homo_sapiens 0.00000000002 75
ENST00000439127 KRT16P3-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 364
ENST00000453795 KRT17P6-001 transcribed_unprocessed_pseudogene Homo_sapiens 1.00053e-42 178
ENST00000455635 KRT19-002 protein_coding Homo_sapiens 0 237
ENST00000458290 KRT15-006 protein_coding Homo_sapiens 0 710
ENST00000463128 KRT17-002 protein_coding Homo_sapiens 0 359
ENST00000463447 KRT15-005 retained_intron Homo_sapiens 0 560
ENST00000464634 KRT13-006 nonsense_mediated_decay Homo_sapiens 0 915
ENST00000468313 KRT13-003 retained_intron Homo_sapiens 0 920
ENST00000468880 KRT19-005 retained_intron Homo_sapiens 0 211
ENST00000470004 KRT15-003 nonsense_mediated_decay Homo_sapiens 0 289
ENST00000470335 KLHL22-005 processed_transcript Homo_sapiens 0.00000000001 75
ENST00000474031 KRT15-008 retained_intron Homo_sapiens 0 828
ENST00000479031 KRT19-004 retained_intron Homo_sapiens 0 187
ENST00000491673 KRT17-004 retained_intron Homo_sapiens 0 193
ENST00000493253 KRT17-003 retained_intron Homo_sapiens 0 366
ENST00000497016 KRT15-002 nonsense_mediated_decay Homo_sapiens 0 619
ENST00000507547 KRT19P3-001 processed_pseudogene Homo_sapiens 0 189
ENST00000540235 KRT17-201 protein_coding Homo_sapiens 0 440
ENST00000577449 KRT17P1-005 retained_intron Homo_sapiens 0 305
ENST00000577817 KRT17-005 protein_coding Homo_sapiens 0 198
ENST00000580113 KRT16P3-004 processed_transcript Homo_sapiens 0 351
ENST00000580363 KRT17P1-003 processed_transcript Homo_sapiens 3.00004e-41 172
ENST00000580621 KRT16P3-002 retained_intron Homo_sapiens 0 374
ENST00000581013 KRT17P6-002 processed_transcript Homo_sapiens 6e-38 161
ENST00000582224 KRT17P1-002 retained_intron Homo_sapiens 0 195
ENST00000584769 KRT17P2-003 processed_transcript Homo_sapiens 0 259
ENST00000587118 KRT13-009 processed_transcript Homo_sapiens 0.00000002 64
ENST00000587544 KRT13-005 protein_coding Homo_sapiens 0 1014
ENST00000588319 KRT16-002 retained_intron Homo_sapiens 0 191
ENST00000590038 KRT17-006 protein_coding Homo_sapiens 0 226
ENST00000590425 KRT13-007 protein_coding Homo_sapiens 0 527
ENST00000593096 KRT19-007 protein_coding Homo_sapiens 0 274

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