C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: small nuclear ribonucleoprotein 25kDa (U11/U12)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000417493 SNRNP25-006 ENSG00000161981 9606 + 16:53899-56613 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartTestisENST00000417493
Transcript ID Bladder Brain Colon Heart Testis
ENST00000417493 1.668±0.00 7.467±0.00 1.898±0.00 18.091±0.00 9.209±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00094P CIL_00094P_0001 VISTA 16:-195470-405616
CIL_0008HK CIL_0008HK_0001 VISTA 16:-187027-414801
CIL_00015Q CIL_00015Q_0001 CGP 16:53010-76355

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000149043 Snrnp25-003 protein_coding Mus_musculus 0 422
ENSMUST00000039601 Snrnp25-001 protein_coding Mus_musculus 0 327
ENSMUST00000155736 Snrnp25-004 processed_transcript Mus_musculus 0 307
ENSMUST00000121182 Snrnp25-005 protein_coding Mus_musculus 0 255
ENSMUST00000125837 Snrnp25-002 retained_intron Mus_musculus 0 207

Loading