C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: EPH receptor A4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000419964 EPHA4-005 ENSG00000116106 9606 - 2:221563997-221569481 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LungENST00000419964
Transcript ID Lung
ENST00000419964 3.319±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006O4 CIL_0006O4_0001 CGP 2:219627327-221574202
CIL_0006XL CIL_0006XL_0001 CGP 2:221418027-222298996

Gene Ontology

GO IDEvidence TypeGO Description
GO:0048013 IEA ephrin receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027451 Epha4-201 protein_coding Mus_musculus 0 630
ENSMUST00000189934 Epha4-004 retained_intron Mus_musculus 0 630
ENSMUST00000188797 Epha4-001 protein_coding Mus_musculus 0 630
ENSMUST00000188952 Epha4-002 nonsense_mediated_decay Mus_musculus 0 630
ENSMUST00000190149 Epha4-003 nonsense_mediated_decay Mus_musculus 0 516

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