C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Eph receptor A4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000190149 Epha4-003 ENSMUSG00000026235 10090 - 1:77373631-77515079 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000190149
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000190149 1.015±0.24 0.239±0.08 25.029±0.00 0.442±0.13 0.847±0.22 2.957±0.56 0.647±0.17 0.039±0.01 1.964±0.19 1.383±0.48 1.607±0.97 0.120±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006O4 CIL_0006O4_0002 CGP 1:75546266-77515088
CIL_0006XL CIL_0006XL_0002 CGP 1:77367185-78197134

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000098632 epha4a-201 protein_coding Danio_rerio 0 1471
ENSDART00000004338 epha4l-001 protein_coding Danio_rerio 0 948
ENSDART00000006787 epha3-001 protein_coding Danio_rerio 0 507
ENSDART00000050395 EPHB3 (2 of 2)-201 protein_coding Danio_rerio 0 411
ENSDART00000149895 epha4a-001 protein_coding Danio_rerio 0 331
ENST00000281821 EPHA4-201 protein_coding Homo_sapiens 0 3860
ENST00000409854 EPHA4-003 protein_coding Homo_sapiens 0 3546
ENST00000409938 EPHA4-001 protein_coding Homo_sapiens 0 3860
ENST00000415749 EPHA4-013 nonsense_mediated_decay Homo_sapiens 0 734
ENST00000419964 EPHA4-005 protein_coding Homo_sapiens 0 516
ENST00000424339 EPHA4-009 nonsense_mediated_decay Homo_sapiens 0 492
ENST00000434266 EPHA4-004 protein_coding Homo_sapiens 0 189
ENST00000441679 EPHA4-006 protein_coding Homo_sapiens 0 734
ENST00000443796 EPHA4-012 protein_coding Homo_sapiens 0 562
ENST00000463446 EPHA4-007 retained_intron Homo_sapiens 0 571
ENST00000495693 EPHA4-008 retained_intron Homo_sapiens 0 291
ENST00000541600 EPHA4-002 protein_coding Homo_sapiens 0 372

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