C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: HMG box domain containing 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000420166 HMGXB4-004 ENSG00000100281 9606 + 22:35257452-35265570 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderLiverMuscleENST00000420166
Transcript ID Bladder Liver Muscle
ENST00000420166 0.558±0.00 1.640±0.00 0.266±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002NP CIL_0002NP_0001 CGP 22:35066136-35295807
CIL_0002NE CIL_0002NE_0001 CGP 22:35257452-35347994

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000041759 Hmgxb4-002 protein_coding Mus_musculus 0 1024
ENSMUST00000145919 Hmgxb4-001 nonsense_mediated_decay Mus_musculus 0 296
ENSMUST00000151062 Hmgxb4-005 processed_transcript Mus_musculus 0 292
ENSMUST00000133585 Hmgxb4-006 retained_intron Mus_musculus 0 261

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