C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heat shock 60kDa protein 1 (chaperonin) pseudogene 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000420325 HSPD1P9-001 ENSG00000228036 9606 - 13:37993085-37994720 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastHeartKidneyLungTestisENST00000420325
Transcript ID Bladder Breast Heart Kidney Lung Testis
ENST00000420325 0.132±0.00 0.021±0.00 0.049±0.00 0.030±0.02 0.032±0.00 0.051±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006CS CIL_0006CS_0002 CGP 13:37636636-38363619

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027123 Hspd1-001 protein_coding Mus_musculus 0 966
ENSMUST00000119713 Gm12141-001 processed_pseudogene Mus_musculus 0 950
ENSMUST00000127861 Hspd1-002 protein_coding Mus_musculus 0 571
ENSMUST00000121815 Gm12725-001 processed_pseudogene Mus_musculus 0 472
ENSMUST00000120603 Gm14465-001 processed_pseudogene Mus_musculus 0 383
ENSMUST00000118299 Gm12667-001 processed_pseudogene Mus_musculus 3e-25 121

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