C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000421230 PPFIA3-005 ENSG00000177380 9606 + 19:49128327-49142918 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonKidneyLiverLungMuscleOvaryPlacentaENST00000421230
Transcript ID Breast Colon Kidney Liver Lung Muscle Ovary Placenta
ENST00000421230 0.152±0.00 0.173±0.00 0.045±0.00 0.209±0.00 0.133±0.00 0.133±0.00 0.872±0.77 0.312±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000003961 Ppfia3-201 protein_coding Mus_musculus 0 1949
ENSMUST00000107779 Ppfia3-001 protein_coding Mus_musculus 0 1949
ENSMUST00000131154 Ppfia3-002 retained_intron Mus_musculus 0 1731
ENSMUST00000137578 Ppfia3-003 protein_coding Mus_musculus 0 1688
ENSDART00000010885 PPFIA1-201 protein_coding Danio_rerio 0 274
ENSMUST00000189361 Ppfia4-003 protein_coding Mus_musculus 0 211
ENSMUST00000168515 Ppfia4-001 protein_coding Mus_musculus 0 211

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