C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: activating transcription factor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000421438 ATF2-005 ENSG00000115966 9606 - 2:175074505-175168169 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001HB CIL_0001HB_0001 CGP 2:174799363-175168382
CIL_0001H6 CIL_0001H6_0001 CGP 2:175072250-175184607

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000156455 Atf2-007 processed_transcript Mus_musculus 0 1325
ENSMUST00000112017 Atf2-202 protein_coding Mus_musculus 0 1005
ENSMUST00000128531 Atf2-011 protein_coding Mus_musculus 0 1005
ENSMUST00000141050 Atf2-003 processed_transcript Mus_musculus 0 1005
ENSMUST00000055833 Atf2-005 protein_coding Mus_musculus 0 1005
ENSMUST00000100009 Atf2-201 protein_coding Mus_musculus 0 955
ENSMUST00000143714 Atf2-004 processed_transcript Mus_musculus 0 955
ENSMUST00000173010 Atf2-017 nonsense_mediated_decay Mus_musculus 0 955
ENSMUST00000112016 Atf2-001 protein_coding Mus_musculus 0 697
ENSMUST00000112007 Atf2-002 protein_coding Mus_musculus 0 682
ENSMUST00000090802 Atf2-006 protein_coding Mus_musculus 0 682
ENSMUST00000112010 Atf2-008 protein_coding Mus_musculus 0 682
ENSMUST00000136958 Atf2-013 protein_coding Mus_musculus 0 647
ENSMUST00000124737 Atf2-015 protein_coding Mus_musculus 0 643
ENSMUST00000129555 Atf2-014 processed_transcript Mus_musculus 0 333
ENSMUST00000154456 Atf2-016 protein_coding Mus_musculus 0 309
ENSMUST00000138098 Atf2-010 processed_transcript Mus_musculus 2e-33 148
ENSMUST00000125159 Atf2-009 processed_transcript Mus_musculus 2e-18 99

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