C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: activating transcription factor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000124737 Atf2-015 ENSMUSG00000027104 10090 - 2:73816509-73845505 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverOvaryPlacentaENSMUST00000124737
Transcript ID Bladder Brain Liver Ovary Placenta
ENSMUST00000124737 2.648±0.00 4.187±1.20 2.478±0.57 3.357±1.26 3.481±0.81

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001HB CIL_0001HB_0002 CGP 2:73610660-73892639
CIL_0001H6 CIL_0001H6_0002 CGP 2:73816509-73911326

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264110 ATF2-001 protein_coding Homo_sapiens 0 1358
ENST00000345739 ATF2-013 protein_coding Homo_sapiens 0 1358
ENST00000392544 ATF2-002 protein_coding Homo_sapiens 0 761
ENST00000409437 ATF2-011 protein_coding Homo_sapiens 0 1358
ENST00000409499 ATF2-014 protein_coding Homo_sapiens 0 477
ENST00000409635 ATF2-012 protein_coding Homo_sapiens 0 761
ENST00000415955 ATF2-007 nonsense_mediated_decay Homo_sapiens 0 761
ENST00000417080 ATF2-003 nonsense_mediated_decay Homo_sapiens 0 761
ENST00000421438 ATF2-005 nonsense_mediated_decay Homo_sapiens 0 643
ENST00000426833 ATF2-201 protein_coding Homo_sapiens 0 1358
ENST00000428760 ATF2-008 nonsense_mediated_decay Homo_sapiens 0 761
ENST00000429579 ATF2-006 nonsense_mediated_decay Homo_sapiens 0 761
ENST00000435004 ATF2-021 protein_coding Homo_sapiens 0 887
ENST00000435231 ATF2-020 nonsense_mediated_decay Homo_sapiens 8e-28 128
ENST00000437522 ATF2-015 protein_coding Homo_sapiens 5e-25 119
ENST00000456655 ATF2-004 nonsense_mediated_decay Homo_sapiens 0 761
ENST00000478905 ATF2-018 retained_intron Homo_sapiens 0 281
ENST00000538946 ATF2-202 protein_coding Homo_sapiens 0 761

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