C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001HB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000128656-ENSG00000115966 CGP 9606 2:174799363-175168382
GeneTranscriptPositionBiotype
ENSG00000115966 (ATF2)
activating transcription factor 2 		ENST00000264110 (ATF2-001) 175072250-175168206 protein_coding
ENST00000345739 (ATF2-013) 175072250-175168206 protein_coding
ENST00000392544 (ATF2-002) 175074505-175168169 protein_coding
ENST00000409437 (ATF2-011) 175072265-175151082 protein_coding
ENST00000409499 (ATF2-014) 175074505-175168169 protein_coding
ENST00000409635 (ATF2-012) 175074280-175168203 protein_coding
ENST00000409833 (ATF2-009) 175114243-175168169 protein_coding
ENST00000413123 (ATF2-017) 175126793-175168144 processed_transcript
ENST00000415955 (ATF2-007) 175074505-175168169 nonsense_mediated_decay
ENST00000417080 (ATF2-003) 175074505-175168169 nonsense_mediated_decay
ENST00000421438 (ATF2-005) 175074505-175168169 nonsense_mediated_decay
ENST00000426833 (ATF2-201) 175072254-175168206 protein_coding
ENST00000428760 (ATF2-008) 175074474-175168169 nonsense_mediated_decay
ENST00000429579 (ATF2-006) 175074505-175168169 nonsense_mediated_decay
ENST00000435004 (ATF2-021) 175074392-175130205 protein_coding
ENST00000435231 (ATF2-020) 175111647-175168168 nonsense_mediated_decay
ENST00000437522 (ATF2-015) 175113994-175168382 protein_coding
ENST00000445349 (ATF2-016) 175126993-175168382 processed_transcript
ENST00000456655 (ATF2-004) 175074505-175168169 nonsense_mediated_decay
ENST00000478905 (ATF2-018) 175080263-175093254 retained_intron
ENST00000538946 (ATF2-202) 175074288-175114812 protein_coding
ENSG00000128656 (CHN1)
chimerin 1 		ENST00000295497 (CHN1-002) 174799492-174847549 protein_coding
ENST00000409089 (CHN1-012) 174801707-174847381 protein_coding
ENST00000409156 (CHN1-003) 174799989-175005369 protein_coding
ENST00000409597 (CHN1-014) 174799515-174846405 protein_coding
ENST00000409900 (CHN1-001) 174799363-175005226 protein_coding
ENST00000413882 (CHN1-013) 174808905-174846415 protein_coding
ENST00000425395 (CHN1-008) 174811533-175005345 nonsense_mediated_decay
ENST00000443238 (CHN1-010) 174808927-174847751 protein_coding
ENST00000444394 (CHN1-011) 174801721-174847565 protein_coding
ENST00000444573 (CHN1-015) 174812377-174847198 protein_coding
ENST00000451799 (CHN1-005) 174915067-175005263 nonsense_mediated_decay
ENST00000469597 (CHN1-006) 174877910-175005219 processed_transcript
ENST00000481174 (CHN1-018) 174837113-174877941 processed_transcript
ENST00000485882 (CHN1-016) 174812098-174846965 retained_intron
ENST00000488080 (CHN1-004) 174799495-175005364 processed_transcript
ENST00000490654 (CHN1-007) 174846914-174915292 retained_intron
ENST00000491801 (CHN1-017) 174810900-174812353 retained_intron
ENST00000492964 (CHN1-009) 174799897-174802057 retained_intron
ENSG00000227187 (RP11-6C10.1)
 ENST00000421086 (RP11-6C10.1-001) 175033778-175034192 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0001HB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000056486-ENSMUSG00000027104 CGP 10090 2:73610660-73892639
GeneTranscriptPositionBiotype
ENSMUSG00000027104 (Atf2)
activating transcription factor 2 		ENSMUST00000055833 (Atf2-005) 73816509-73892614 protein_coding
ENSMUST00000090802 (Atf2-006) 73816509-73892612 protein_coding
ENSMUST00000100009 (Atf2-201) 73816524-73863290 protein_coding
ENSMUST00000112007 (Atf2-002) 73816509-73892631 protein_coding
ENSMUST00000112010 (Atf2-008) 73816509-73892536 protein_coding
ENSMUST00000112016 (Atf2-001) 73816509-73892639 protein_coding
ENSMUST00000112017 (Atf2-202) 73818266-73892555 protein_coding
ENSMUST00000124737 (Atf2-015) 73816509-73845505 protein_coding
ENSMUST00000125159 (Atf2-009) 73862969-73892628 processed_transcript
ENSMUST00000128531 (Atf2-011) 73845440-73892553 protein_coding
ENSMUST00000129555 (Atf2-014) 73845734-73850604 processed_transcript
ENSMUST00000136958 (Atf2-013) 73829801-73892530 protein_coding
ENSMUST00000138098 (Atf2-010) 73862876-73892594 processed_transcript
ENSMUST00000141050 (Atf2-003) 73844869-73892628 processed_transcript
ENSMUST00000143714 (Atf2-004) 73826359-73892613 processed_transcript
ENSMUST00000154456 (Atf2-016) 73845439-73892593 protein_coding
ENSMUST00000154965 (Atf2-012) 73873274-73892550 processed_transcript
ENSMUST00000156455 (Atf2-007) 73816520-73892628 processed_transcript
ENSMUST00000173010 (Atf2-017) 73818822-73863238 nonsense_mediated_decay
ENSMUSG00000056486 (Chn1)
chimerin 1 		ENSMUST00000070579 (Chn1-003) 73612888-73625740 protein_coding
ENSMUST00000102677 (Chn1-002) 73610745-73660406 protein_coding
ENSMUST00000112024 (Chn1-001) 73610660-73775346 protein_coding
ENSMUST00000124450 (Chn1-006) 73613084-73716409 nonsense_mediated_decay
ENSMUST00000135904 (Chn1-005) 73679622-73768853 protein_coding
ENSMUST00000136953 (Chn1-008) 73624160-73655058 protein_coding
ENSMUST00000139252 (Chn1-004) 73624878-73775326 nonsense_mediated_decay
ENSMUST00000154258 (Chn1-007) 73624118-73660376 protein_coding
ENSMUST00000166199 (Chn1-201) 73610660-73775346 protein_coding
ENSMUST00000180045 (Chn1-202) 73610660-73775346 protein_coding
ENSMUSG00000081062 (Gm13640)
predicted gene 13640 		ENSMUST00000118445 (Gm13640-001) 73809162-73809425 processed_pseudogene
ENSMUSG00000085838 (Chn1os1)
chimerin 1, opposite strand 1 		ENSMUST00000123613 (Chn1os1-001) 73658270-73660263 antisense
ENSMUSG00000086544 (Chn1os3)
chimerin 1, opposite strand 3 		ENSMUST00000147420 (Chn1os3-001) 73596526-73616012 antisense
ENSMUST00000149231 (Chn1os3-002) 73596824-73599200 antisense

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001HB_0001ENSG00000115966ENST00000264110ENST00000345739ENST00000392544ENST00000409437ENST00000409499ENST00000409635ENST00000409833ENST00000413123ENST00000415955ENST00000417080ENST00000421438ENST00000426833ENST00000428760ENST00000429579ENST00000435004ENST00000435231ENST00000437522ENST00000445349ENST00000456655ENST00000478905ENST00000538946ENSG00000128656ENST00000295497ENST00000409089ENST00000409156ENST00000409597ENST00000409900ENST00000413882ENST00000425395ENST00000443238ENST00000444394ENST00000444573ENST00000451799ENST00000469597ENST00000481174ENST00000485882ENST00000488080ENST00000490654ENST00000491801ENST00000492964ENSG00000227187ENST00000421086CIL_0001HB_0002ENSMUSG00000027104ENSMUST00000055833ENSMUST00000090802ENSMUST00000100009ENSMUST00000112007ENSMUST00000112010ENSMUST00000112016ENSMUST00000112017ENSMUST00000124737ENSMUST00000125159ENSMUST00000128531ENSMUST00000129555ENSMUST00000136958ENSMUST00000138098ENSMUST00000141050ENSMUST00000143714ENSMUST00000154456ENSMUST00000154965ENSMUST00000156455ENSMUST00000173010ENSMUSG00000056486ENSMUST00000070579ENSMUST00000102677ENSMUST00000112024ENSMUST00000124450ENSMUST00000135904ENSMUST00000136953ENSMUST00000139252ENSMUST00000154258ENSMUST00000166199ENSMUST00000180045ENSMUSG00000081062ENSMUST00000118445ENSMUSG00000085838ENSMUST00000123613ENSMUSG00000086544ENSMUST00000147420ENSMUST00000149231
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001HB_0001ENSG00000115966ENST00000264110ENST00000345739ENST00000392544ENST00000409437ENST00000409833ENST00000426833ENST00000428760ENST00000435231ENST00000437522ENST00000456655ENST00000538946ENSG00000128656ENST00000295497ENST00000409156ENST00000409597ENST00000409900ENST00000444573ENST00000481174ENST00000488080ENST00000490654ENSG00000227187ENST00000421086CIL_0001HB_0002ENSMUSG00000027104ENSMUST00000055833ENSMUST00000090802ENSMUST00000100009ENSMUST00000112007ENSMUST00000112010ENSMUST00000112016ENSMUST00000112017ENSMUST00000124737ENSMUST00000128531ENSMUST00000143714ENSMUST00000173010ENSMUSG00000056486ENSMUST00000070579ENSMUST00000102677ENSMUST00000124450ENSMUST00000135904ENSMUST00000139252ENSMUST00000154258ENSMUST00000180045ENSMUSG00000081062ENSMUST00000118445ENSMUSG00000085838ENSMUST00000123613ENSMUSG00000086544ENSMUST00000147420ENSMUST00000149231
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000115966 ENST00000264110 5.145±0.00 1.778±0.00 N/A 7.764±2.18 4.410±0.00 2.120±0.48 1.197±0.00 1.182±0.00 2.081±0.00 N/A 2.483±0.00 4.582±1.84 1.989±0.43 10.836±0.00
ENST00000345739 N/A 1.633±0.00 0.796±0.00 N/A 1.663±0.00 2.885±1.02 N/A 4.495±0.00 3.149±0.00 1.868±0.30 0.950±0.00 1.627±0.05 1.206±0.21 N/A
ENST00000392544 N/A N/A N/A N/A N/A 2.701±0.00 0.796±0.00 2.318±0.00 2.855±0.00 5.171±0.00 N/A N/A N/A N/A
ENST00000409437 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.376±0.00 1.956±0.00 4.587±0.00
ENST00000409499 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409635 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409833 N/A N/A N/A N/A 1.733±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000413123 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000415955 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000417080 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000421438 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000426833 N/A 0.782±0.00 N/A 3.611±0.00 2.727±0.00 N/A 2.362±0.00 N/A 1.619±0.00 4.065±0.00 0.268±0.00 N/A N/A N/A
ENST00000428760 N/A N/A N/A N/A N/A 1.596±0.00 N/A N/A N/A N/A 1.340±0.00 2.267±0.00 N/A N/A
ENST00000429579 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000435004 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000435231 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.646±0.00 N/A N/A N/A
ENST00000437522 N/A N/A N/A N/A N/A N/A N/A 1.830±0.00 N/A N/A N/A N/A N/A N/A
ENST00000445349 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000456655 N/A N/A 1.042±0.00 N/A 1.938±0.00 N/A 0.816±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000478905 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538946 N/A N/A 3.554±0.00 N/A N/A N/A N/A N/A N/A N/A 2.993±0.00 N/A N/A 8.953±0.00
ENSG00000128656 ENST00000295497 N/A 3.609±0.00 N/A 138.279±34.36 0.540±0.00 N/A 0.369±0.00 N/A 0.678±0.00 4.626±1.54 0.018±0.00 1.156±0.33 5.180±2.01 N/A
ENST00000409089 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409156 N/A N/A N/A N/A N/A 1.767±0.00 0.775±0.17 0.787±0.00 N/A N/A N/A N/A N/A N/A
ENST00000409597 1.694±0.00 7.088±0.00 N/A 141.957±0.00 0.823±0.00 0.950±0.00 1.185±0.00 0.452±0.00 0.114±0.00 4.605±0.00 0.414±0.00 1.728±0.00 4.440±0.00 10.577±0.00
ENST00000409900 N/A 3.894±0.00 N/A N/A 0.921±0.20 1.289±0.00 1.413±0.00 0.210±0.00 0.775±0.00 1.265±0.00 N/A 0.799±0.35 1.874±0.57 6.201±0.00
ENST00000413882 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000425395 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000443238 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000444394 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000444573 N/A N/A N/A N/A N/A N/A N/A N/A 1.690±0.00 N/A N/A N/A N/A N/A
ENST00000451799 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469597 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481174 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.062±0.00 N/A N/A
ENST00000485882 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488080 N/A N/A N/A N/A N/A 1.523±0.00 N/A 1.035±0.00 0.474±0.00 N/A N/A 0.630±0.00 N/A N/A
ENST00000490654 N/A N/A 2.547±0.00 N/A 4.343±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491801 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492964 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000227187 ENST00000421086 N/A 0.027±0.00 N/A N/A 1.237±0.00 0.666±0.00 N/A N/A N/A N/A 0.049±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027104 ENSMUST00000055833 2.551±0.68 N/A 1.968±0.00 3.122±0.00 2.969±0.00 N/A 1.468±0.51 1.662±0.53 1.221±0.00 3.839±0.80 0.421±0.01 2.601±0.00 2.777±0.00 N/A
ENSMUST00000090802 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.646±0.00 N/A N/A N/A
ENSMUST00000100009 3.120±0.35 3.166±1.32 3.840±0.00 6.045±3.53 2.552±1.21 3.213±1.30 0.837±0.13 2.735±1.26 1.988±0.61 2.551±0.80 0.808±0.20 4.655±1.28 3.994±2.23 N/A
ENSMUST00000112007 1.341±0.00 2.112±0.92 1.206±0.00 N/A N/A 1.817±0.25 1.049±0.35 2.260±0.41 0.689±0.09 3.131±1.48 0.746±0.08 1.748±0.00 1.760±0.00 3.140±1.59
ENSMUST00000112010 0.941±0.00 N/A N/A N/A 1.694±0.58 N/A 1.386±0.21 1.482±0.10 1.540±0.50 1.820±0.00 1.353±0.65 2.951±1.37 4.001±1.52 2.726±0.24
ENSMUST00000112016 N/A N/A 2.091±0.55 4.413±1.42 N/A N/A N/A N/A 1.219±0.00 N/A 0.742±0.20 3.079±0.79 1.712±0.30 N/A
ENSMUST00000112017 N/A N/A N/A 5.488±0.00 N/A N/A N/A N/A N/A N/A N/A 4.617±0.00 4.353±1.24 2.641±0.38
ENSMUST00000124737 N/A N/A 2.648±0.00 4.187±1.20 N/A N/A N/A N/A 2.478±0.57 N/A N/A 3.357±1.26 3.481±0.81 N/A
ENSMUST00000125159 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128531 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.712±0.00 N/A
ENSMUST00000129555 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136958 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138098 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141050 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143714 N/A N/A N/A N/A 1.922±0.00 N/A N/A N/A N/A N/A N/A 1.710±0.56 N/A N/A
ENSMUST00000154456 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154965 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156455 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173010 N/A 1.819±0.42 N/A N/A 2.721±0.91 2.103±0.46 N/A 2.572±0.00 1.112±0.00 2.582±0.00 N/A N/A N/A 11.938±2.70
ENSMUSG00000056486 ENSMUST00000070579 N/A N/A N/A 491.036±0.00 N/A N/A N/A N/A 0.351±0.12 N/A 0.671±0.07 4.218±1.77 5.457±0.01 38.353±9.06
ENSMUST00000102677 N/A N/A N/A 38.625±0.00 N/A 3.016±1.21 N/A N/A 0.028±0.00 N/A 0.080±0.00 0.993±0.00 N/A N/A
ENSMUST00000112024 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124450 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.753±0.00 N/A N/A
ENSMUST00000135904 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.588±0.00 N/A N/A N/A
ENSMUST00000136953 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139252 N/A N/A N/A N/A N/A 1.243±0.28 N/A N/A N/A N/A N/A 1.103±0.42 3.106±0.00 N/A
ENSMUST00000154258 N/A N/A N/A 172.127±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000166199 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000180045 1.303±0.00 N/A 1.819±0.00 32.377±4.79 N/A N/A 1.849±0.60 N/A 0.098±0.05 N/A 0.215±0.08 0.828±0.27 0.310±0.05 6.791±5.07
ENSMUSG00000081062 ENSMUST00000118445 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.104±0.00 N/A
ENSMUSG00000085838 ENSMUST00000123613 N/A N/A N/A 315.342±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000086544 ENSMUST00000147420 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.195±0.77 N/A
ENSMUST00000149231 N/A N/A N/A N/A N/A N/A N/A N/A 0.847±0.23 N/A N/A 5.814±2.94 6.101±0.00 N/A

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