| Transcript ID | Brain | Breast | Ovary |
|---|---|---|---|
| ENST00000421484 | 1.427±0.00 | 2.613±0.00 | 1.081±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | presenilin associated, rhomboid-like | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000421484  |
PARL-004 |
ENSG00000175193 |
9606 | - |
3:183829509-183884908  |
nonsense_mediated_decay |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0005G0 | CIL_0005G0_0001 | CGP | 3:183815876-183884933 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0004252 | IEA | serine-type endopeptidase activity |
| GO:0005739 | IDA | mitochondrion |
| GO:0006508 | IEA | proteolysis |
| GO:0016021 | IEA | integral component of membrane |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000136252
|
Parl-002 | nonsense_mediated_decay | Mus_musculus | 0 | 1426 |
|
ENSMUST00000133153
|
Parl-009 | nonsense_mediated_decay | Mus_musculus | 0 | 874 |
|
ENSMUST00000048642
|
Parl-001 | protein_coding | Mus_musculus | 0 | 776 |
|
ENSMUST00000120117
|
Gm13181-001 | processed_pseudogene | Mus_musculus | 0 | 560 |
|
ENSMUST00000136700
|
Parl-005 | processed_transcript | Mus_musculus | 0 | 486 |
|
ENSMUST00000123070
|
Parl-003 | retained_intron | Mus_musculus | 0 | 462 |
|
ENSMUST00000126001
|
Parl-008 | retained_intron | Mus_musculus | 0 | 396 |
|
ENSMUST00000152887
|
Parl-004 | processed_transcript | Mus_musculus | 0 | 394 |
|
ENSMUST00000143648
|
Parl-006 | retained_intron | Mus_musculus | 0 | 387 |
|
ENSMUST00000155832
|
Parl-007 | retained_intron | Mus_musculus | 0 | 326 |
|
ENSMUST00000153275
|
Parl-010 | retained_intron | Mus_musculus | 0 | 315 |
|
ENSMUST00000117482
|
Gm14994-001 | processed_pseudogene | Mus_musculus | 1.4013e-45 | 187 |
