C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: presenilin associated, rhomboid-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000155832 Parl-007 ENSMUSG00000033918 10090 - 16:20280003-20283244 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainOvaryPlacentaTestisENSMUST00000155832
Transcript ID Adrenal Brain Ovary Placenta Testis
ENSMUST00000155832 4.844±0.00 17.006±0.00 39.449±0.00 25.093±14.88 18.134±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005G0 CIL_0005G0_0002 CGP 16:20233310-20302387

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000311101 PARL-002 protein_coding Homo_sapiens 0 326
ENST00000317096 PARL-001 protein_coding Homo_sapiens 0 326
ENST00000402907 RP1-95L4.4-001 processed_pseudogene Homo_sapiens 0 267
ENST00000417784 PARL-009 protein_coding Homo_sapiens 0 326
ENST00000418450 PARL-010 protein_coding Homo_sapiens 0 241
ENST00000421484 PARL-004 nonsense_mediated_decay Homo_sapiens 0 326
ENST00000435888 PARL-007 protein_coding Homo_sapiens 0 241
ENST00000482027 RP11-767L7.1-001 processed_pseudogene Homo_sapiens 0 268

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