C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: heterogeneous nuclear ribonucleoprotein A1 pseudogene 30
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000424329 HNRNPA1P30-002 ENSG00000233780 9606 - 13:20938564-20949428 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000424329
Transcript ID Testis
ENST00000424329 0.166±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003SQ CIL_0003SQ_0001 CGP 13:20777329-21061547

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000168019 Gm10052-001 processed_pseudogene Mus_musculus 5e-40 169
ENSMUST00000087351 Hnrnpa1-202 protein_coding Mus_musculus 5e-40 169
ENSMUST00000036004 Hnrnpa1-201 protein_coding Mus_musculus 5e-40 169
ENSMUST00000050143 Gm7729-001 unprocessed_pseudogene Mus_musculus 2e-38 163
ENSMUST00000117081 Gm5643-001 processed_pseudogene Mus_musculus 2e-38 163
ENSMUST00000118970 Gm16216-001 processed_pseudogene Mus_musculus 2e-38 163
ENSMUST00000181363 Gm8652-001 processed_pseudogene Mus_musculus 1e-36 158
ENSMUST00000122005 Gm12382-001 processed_pseudogene Mus_musculus 3e-27 126
ENSMUST00000184038 Gm5269-001 translated_processed_pseudogene Mus_musculus 1e-25 121
ENSMUST00000189260 RP23-389M9.4-001 processed_pseudogene Mus_musculus 3e-22 110

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