C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 8652
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000181363 Gm8652-001 ENSMUSG00000097900 10090 - 6:6351304-6352267 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainHeartLiverOvaryPlacentaTestisENSMUST00000181363
Transcript ID Bladder Brain Heart Liver Ovary Placenta Testis
ENSMUST00000181363 0.027±0.00 0.021±0.01 0.367±0.14 0.030±0.00 0.045±0.00 0.006±0.00 0.711±0.66

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007W8 CIL_0007W8_0002 VISTA 6:5861772-6464755
CIL_00097Z CIL_00097Z_0002 VISTA 6:6016533-6617120
CIL_00078J CIL_00078J_0002 CGP 6:6041218-6578658
CIL_000980 CIL_000980_0002 VISTA 6:6063941-6664446
CIL_000981 CIL_000981_0002 VISTA 6:6158809-6759381

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000330752 HNRNPA1-023 protein_coding Homo_sapiens 0 874
ENST00000340913 HNRNPA1-002 protein_coding Homo_sapiens 0 989
ENST00000342073 HNRNPA1P61-001 processed_pseudogene Homo_sapiens 0 953
ENST00000357495 HNRNPA1L2-001 protein_coding Homo_sapiens 0 1218
ENST00000391992 HNRNPA1P34-001 processed_pseudogene Homo_sapiens 0 981
ENST00000394002 HNRNPA1P6-001 unprocessed_pseudogene Homo_sapiens 0 1024
ENST00000396326 HNRNPA1P32-001 processed_pseudogene Homo_sapiens 0 776
ENST00000397777 HNRNPA1P41-001 processed_pseudogene Homo_sapiens 0 571
ENST00000401954 HNRNPA1P1-001 processed_pseudogene Homo_sapiens 0 894
ENST00000404243 HNRNPA1P37-001 processed_pseudogene Homo_sapiens 0 1013
ENST00000405292 HNRNPA1P19-001 processed_pseudogene Homo_sapiens 0 394
ENST00000411674 HNRNPA1P64-001 processed_pseudogene Homo_sapiens 0 706
ENST00000411857 HNRNPA1P54-001 processed_pseudogene Homo_sapiens 0 758
ENST00000414732 HNRNPA1P2-001 processed_pseudogene Homo_sapiens 0 1079
ENST00000416539 HNRNPA1P66-001 processed_pseudogene Homo_sapiens 0 797
ENST00000420836 HNRNPA1P70-001 processed_pseudogene Homo_sapiens 0 654
ENST00000421426 HNRNPA1P33-001 processed_pseudogene Homo_sapiens 0 647
ENST00000422644 HNRNPA1P25-001 processed_pseudogene Homo_sapiens 0 822
ENST00000424115 HNRNPA1P21-001 processed_pseudogene Homo_sapiens 0 1110
ENST00000424329 HNRNPA1P30-002 processed_transcript Homo_sapiens 1e-36 158
ENST00000424481 HNRNPA1P28-001 processed_pseudogene Homo_sapiens 0 1077
ENST00000426371 HNRNPA1P40-001 processed_pseudogene Homo_sapiens 0 966
ENST00000427917 HNRNPA1P63-001 processed_pseudogene Homo_sapiens 0 1068
ENST00000429216 HNRNPA1P35-001 processed_pseudogene Homo_sapiens 0 1190
ENST00000430583 HNRNPA1P59-001 processed_pseudogene Homo_sapiens 0 667
ENST00000431344 HNRNPA1P2-001 processed_pseudogene Homo_sapiens 0 1085
ENST00000432375 HNRNPA1P2-001 processed_pseudogene Homo_sapiens 0 1096
ENST00000436090 HNRNPA1P8-001 processed_pseudogene Homo_sapiens 0 1164
ENST00000436809 HNRNPA1P2-001 processed_pseudogene Homo_sapiens 0 1090
ENST00000437295 HNRNPA1P22-001 processed_pseudogene Homo_sapiens 0 1059
ENST00000440214 AC108039.3-001 processed_pseudogene Homo_sapiens 0 385
ENST00000440352 HNRNPA1P14-001 processed_pseudogene Homo_sapiens 0 298
ENST00000440547 HNRNPA1P39-001 processed_pseudogene Homo_sapiens 0 1037
ENST00000440699 HNRNPA1P30-001 transcribed_processed_pseudogene Homo_sapiens 0 933
ENST00000441603 HNRNPA1P53-001 processed_pseudogene Homo_sapiens 0 1014
ENST00000444886 HNRNPA1P15-001 processed_pseudogene Homo_sapiens 0 1035
ENST00000444945 HNRNPA1P10-001 processed_pseudogene Homo_sapiens 0 1262
ENST00000446472 HNRNPA1P73-001 processed_pseudogene Homo_sapiens 0 813
ENST00000446988 HNRNPA1P2-001 processed_pseudogene Homo_sapiens 0 1101
ENST00000446999 HNRNPA1P2-001 processed_pseudogene Homo_sapiens 0 1101
ENST00000450405 HNRNPA1P51-001 processed_pseudogene Homo_sapiens 0 1105
ENST00000450624 HNRNPA1P9-001 processed_pseudogene Homo_sapiens 0 915
ENST00000452488 HNRNPA1P57-001 transcribed_processed_pseudogene Homo_sapiens 0 1055
ENST00000452680 HNRNPA1P43-001 processed_pseudogene Homo_sapiens 0 725
ENST00000452727 HNRNPA1P2-001 processed_pseudogene Homo_sapiens 0 1096
ENST00000457180 HNRNPA1P2-001 processed_pseudogene Homo_sapiens 0 1101
ENST00000457695 HNRNPA1P26-001 processed_pseudogene Homo_sapiens 0 250
ENST00000458678 HNRNPA1P42-001 processed_pseudogene Homo_sapiens 0 1086
ENST00000474219 HNRNPA3P8-001 processed_pseudogene Homo_sapiens 0 717
ENST00000476029 HNRNPA1P24-001 processed_pseudogene Homo_sapiens 0 586
ENST00000484852 HNRNPA1P20-001 processed_pseudogene Homo_sapiens 0 1026
ENST00000491091 HNRNPA1P23-001 processed_pseudogene Homo_sapiens 0 673
ENST00000503999 HNRNPA1P44-001 processed_pseudogene Homo_sapiens 0 830
ENST00000505767 HNRNPA1P56-001 processed_pseudogene Homo_sapiens 0 1066
ENST00000505935 HNRNPA1P55-001 processed_pseudogene Homo_sapiens 0 1057
ENST00000508873 HNRNPA1P65-001 processed_pseudogene Homo_sapiens 0 861
ENST00000509706 HNRNPA1P4-001 processed_pseudogene Homo_sapiens 0 992
ENST00000510646 HNRNPA1P13-001 processed_pseudogene Homo_sapiens 0 1024
ENST00000515379 HNRNPA1P12-001 processed_pseudogene Homo_sapiens 0 1179
ENST00000521273 HNRNPA1P7-001 processed_pseudogene Homo_sapiens 0 1240
ENST00000521313 HNRNPA1P36-001 processed_pseudogene Homo_sapiens 0 1038
ENST00000526810 HNRNPA1P60-001 processed_pseudogene Homo_sapiens 0 970
ENST00000529475 HNRNPA1P76-001 processed_pseudogene Homo_sapiens 1e-25 121
ENST00000546500 HNRNPA1-001 protein_coding Homo_sapiens 0 1267
ENST00000546565 HNRNPA1P50-001 processed_pseudogene Homo_sapiens 0 915
ENST00000547276 HNRNPA1-012 protein_coding Homo_sapiens 0 800
ENST00000547566 HNRNPA1-006 nonsense_mediated_decay Homo_sapiens 0 1267
ENST00000547708 HNRNPA1-015 protein_coding Homo_sapiens 0 429
ENST00000547870 HNRNPA1-016 retained_intron Homo_sapiens 0 593
ENST00000548688 HNRNPA1-013 protein_coding Homo_sapiens 0 804
ENST00000550482 HNRNPA1-018 protein_coding Homo_sapiens 0 760
ENST00000550994 HNRNPA1-014 protein_coding Homo_sapiens 0 588
ENST00000551679 HNRNPA1-020 retained_intron Homo_sapiens 0 287
ENST00000551702 HNRNPA1-019 protein_coding Homo_sapiens 0 401
ENST00000552536 HNRNPA1P69-001 processed_pseudogene Homo_sapiens 0 702
ENST00000558213 HNRNPA1P5-001 processed_pseudogene Homo_sapiens 0 1066
ENST00000560782 HNRNPA1P74-001 processed_pseudogene Homo_sapiens 0 719
ENST00000560893 HNRNPA1P45-001 processed_pseudogene Homo_sapiens 0 241
ENST00000562726 HNRNPA1P48-002 processed_transcript Homo_sapiens 0 1256
ENST00000565308 HNRNPA1P48-001 transcribed_processed_pseudogene Homo_sapiens 0 1254
ENST00000575692 HNRNPA1P16-001 processed_pseudogene Homo_sapiens 0 1075
ENST00000580106 HNRNPA1P11-001 processed_pseudogene Homo_sapiens 0 944
ENST00000599047 HNRNPA1P52-001 processed_pseudogene Homo_sapiens 0 1016
ENST00000604027 HNRNPA1P67-001 processed_pseudogene Homo_sapiens 0 907

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