C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: syndecan binding protein (syntenin) pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000424643 SDCBPP2-001 ENSG00000247570 9606 + 8:69942948-69944648 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLungOvaryTestisENST00000424643
Transcript ID Adipose Adrenal Brain Breast Colon Heart Lung Ovary Testis
ENST00000424643 0.055±0.00 0.042±0.00 0.072±0.00 0.014±0.00 0.013±0.00 0.064±0.00 0.013±0.00 0.062±0.00 0.199±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003BE CIL_0003BE_0001 CGP 8:69667047-70071693

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029912 Sdcbp-001 protein_coding Mus_musculus 0 717
ENSMUST00000103008 Sdcbp-002 protein_coding Mus_musculus 0 715
ENSMUST00000175769 Sdcbp-008 protein_coding Mus_musculus 0 586
ENSMUST00000153861 Sdcbp-005 protein_coding Mus_musculus 0 573
ENSMUST00000108374 Sdcbp-003 protein_coding Mus_musculus 0 523

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