C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: splicing factor 3b, subunit 1, 155kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000424674 SF3B1-012 ENSG00000115524 9606 - 2:197393052-197399028 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaTestisENST00000424674
Transcript ID Ovary Placenta Testis
ENST00000424674 104.434±29.59 30.061±0.00 50.455±11.93

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00042O CIL_00042O_0002 CGP 2:196967017-197435091
CIL_0007X7 CIL_0007X7_0001 VISTA 2:196975905-197591368
CIL_00042R CIL_00042R_0002 CGP 2:197389784-197475308

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005488 IEA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027127 Sf3b1-001 protein_coding Mus_musculus 0 905
ENSMUST00000190175 Sf3b1-004 retained_intron Mus_musculus 0 516
ENSMUST00000185429 Sf3b1-005 retained_intron Mus_musculus 0 351

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