C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: plakophilin 4 pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000426801 PKP4P1-001 ENSG00000229670 9606 + 2:209178966-209181123 unprocessed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainHeartKidneyLiverLungOvaryTestisENST00000426801
Transcript ID Adrenal Brain Heart Kidney Liver Lung Ovary Testis
ENST00000426801 0.012±0.00 0.006±0.00 0.006±0.00 0.006±0.00 0.080±0.00 0.050±0.00 0.006±0.00 0.021±0.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000168631 Pkp4-201 protein_coding Mus_musculus 0 2287
ENSMUST00000037903 Pkp4-004 protein_coding Mus_musculus 0 2049
ENSMUST00000112577 Pkp4-010 protein_coding Mus_musculus 0 1899
ENSMUST00000183359 Pkp4-003 nonsense_mediated_decay Mus_musculus 0 1899
ENSMUST00000102754 Pkp4-001 protein_coding Mus_musculus 0 1899
ENSMUST00000151452 Pkp4-013 processed_transcript Mus_musculus 0 1290
ENSMUST00000184332 Pkp4-005 nonsense_mediated_decay Mus_musculus 0 1053
ENSMUST00000123908 Pkp4-002 protein_coding Mus_musculus 0 815
ENSMUST00000124127 Pkp4-012 processed_transcript Mus_musculus 0 536

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