C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000427719 AC010095.7-001 ENSG00000235644 9606 - 2:108712262-108712900 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000427719
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000427719 0.173±0.00 0.154±0.00 0.034±0.00 0.129±0.00 0.118±0.00 0.055±0.00 0.064±0.00 0.056±0.00 0.119±0.00 0.158±0.00 0.043±0.00 0.134±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RA CIL_0007RA_0001 VISTA 2:108335931-108937600
CIL_00010W CIL_00010W_0001 CGP 2:108534355-108785811

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000119438 Rpl10-ps1-001 transcribed_processed_pseudogene Mus_musculus 0 676
ENSMUST00000074085 Rpl10-002 protein_coding Mus_musculus 0 676
ENSMUST00000008826 Rpl10-001 protein_coding Mus_musculus 0 676
ENSMUST00000076364 Rpl10-ps3-201 protein_coding Mus_musculus 0 676
ENSMUST00000121321 Rpl10-ps6-001 processed_pseudogene Mus_musculus 0 671
ENSMUST00000151702 Rpl10-003 protein_coding Mus_musculus 0 638
ENSMUST00000076465 Gm5621-201 processed_pseudogene Mus_musculus 0 627
ENSMUST00000187303 RP23-435I22.2-001 processed_pseudogene Mus_musculus 0 625
ENSMUST00000081908 Rpl10l-001 protein_coding Mus_musculus 0 521
ENSMUST00000075377 Gm6564-201 processed_pseudogene Mus_musculus 0 518
ENSMUST00000121511 Gm14460-001 processed_pseudogene Mus_musculus 0 505
ENSMUST00000134330 Rpl10-009 retained_intron Mus_musculus 0 472
ENSMUST00000125775 Rpl10-005 retained_intron Mus_musculus 0 422
ENSMUST00000149171 Rpl10-004 processed_transcript Mus_musculus 0 411
ENSMUST00000135690 Rpl10-011 protein_coding Mus_musculus 0 359
ENSMUST00000138954 Rpl10-006 retained_intron Mus_musculus 0 261
ENSMUST00000146584 Rpl10-010 retained_intron Mus_musculus 0 244
ENSMUST00000117120 Rpl10-ps4-001 processed_pseudogene Mus_musculus 0 207

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