C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation elongation factor 1 alpha 1 pseudogene 36
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000427807 EEF1A1P36-001 ENSG00000223912 9606 + 6:132271982-132273332 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalColonKidneyLiverLungMuscleOvaryTestisENST00000427807
Transcript ID Adipose Adrenal Colon Kidney Liver Lung Muscle Ovary Testis
ENST00000427807 0.049±0.00 0.010±0.00 0.075±0.00 0.060±0.00 0.018±0.00 0.019±0.00 0.017±0.00 0.070±0.00 0.025±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00097U CIL_00097U_0001 VISTA 6:131762456-132364269

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000042235 Eef1a1-001 protein_coding Mus_musculus 0 935
ENSMUST00000118928 Gm13456-001 processed_pseudogene Mus_musculus 0 893
ENSMUST00000161562 Gm5822-001 processed_pseudogene Mus_musculus 0 736
ENSMUST00000121596 Gm12912-001 processed_pseudogene Mus_musculus 0 665
ENSMUST00000144523 Eef1a1-005 retained_intron Mus_musculus 0 542
ENSMUST00000154207 Eef1a1-008 protein_coding Mus_musculus 0 508
ENSMUST00000126614 Eef1a1-006 retained_intron Mus_musculus 0 416
ENSMUST00000156988 Eef1a1-003 protein_coding Mus_musculus 0 348

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