C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 5822
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161562 Gm5822-001 ENSMUSG00000089993 10090 - 19:28862330-28863707 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000161562
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000161562 0.128±0.12 0.169±0.06 0.164±0.06 0.246±0.23 0.134±0.06 0.048±0.02 0.455±0.06 0.072±0.03 0.140±0.06 0.045±0.02 0.309±0.25 0.528±0.37 0.058±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000NI CIL_0000NI_0002 CGP 19:28258851-28913960
CIL_0000NJ CIL_0000NJ_0002 CGP 19:28835049-28967800

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000309268 EEF1A1-009 protein_coding Homo_sapiens 0 1624
ENST00000316292 EEF1A1-001 protein_coding Homo_sapiens 0 1624
ENST00000325349 EEF1A1P16-001 processed_pseudogene Homo_sapiens 0 1264
ENST00000331523 EEF1A1-004 protein_coding Homo_sapiens 0 1624
ENST00000356303 EEF1A1-015 protein_coding Homo_sapiens 0 542
ENST00000359165 EEF1A1P4-001 processed_pseudogene Homo_sapiens 0 1323
ENST00000395772 EEF1A1P15-001 processed_pseudogene Homo_sapiens 0 604
ENST00000401075 RP11-439L8.2-001 processed_pseudogene Homo_sapiens 0 881
ENST00000415278 EEF1A1P11-001 processed_pseudogene Homo_sapiens 0 1485
ENST00000416082 EEF1A1P29-001 processed_pseudogene Homo_sapiens 0 593
ENST00000417549 EEF1A1P3-001 processed_pseudogene Homo_sapiens 0 1240
ENST00000419025 EEF1A1P8-001 processed_pseudogene Homo_sapiens 0 1363
ENST00000419888 EEF1A1P34-001 processed_pseudogene Homo_sapiens 0 739
ENST00000420064 RP11-175P19.2-001 transcribed_processed_pseudogene Homo_sapiens 0 381
ENST00000421195 EEF1A1P14-001 processed_pseudogene Homo_sapiens 0 1219
ENST00000427807 EEF1A1P36-001 processed_pseudogene Homo_sapiens 0 736
ENST00000429708 EEF1A1P30-001 processed_pseudogene Homo_sapiens 0 939
ENST00000429983 EEF1A1P27-001 processed_pseudogene Homo_sapiens 0 630
ENST00000430498 RP11-104D3.2-001 processed_pseudogene Homo_sapiens 0 1038
ENST00000430685 RP11-214N15.5-001 processed_pseudogene Homo_sapiens 0 248
ENST00000434005 EEF1A1P6-001 processed_pseudogene Homo_sapiens 0 1589
ENST00000436459 EEF1A1P5-001 processed_pseudogene Homo_sapiens 0 1613
ENST00000443590 EEF1A1P12-001 processed_pseudogene Homo_sapiens 0 736
ENST00000445363 AC010240.2-001 processed_pseudogene Homo_sapiens 0 734
ENST00000449483 RP11-175P19.2-002 processed_transcript Homo_sapiens 0 255
ENST00000450915 EEF1A1P28-001 processed_pseudogene Homo_sapiens 0 1038
ENST00000451469 EEF1A1P24-001 processed_pseudogene Homo_sapiens 0 1304
ENST00000455918 EEF1A1-003 protein_coding Homo_sapiens 0 368
ENST00000475365 EEF1A1P10-001 processed_pseudogene Homo_sapiens 0 1371
ENST00000488500 EEF1A1-011 retained_intron Homo_sapiens 0 761
ENST00000490569 EEF1A1-008 retained_intron Homo_sapiens 0 1184
ENST00000491404 EEF1A1-014 processed_transcript Homo_sapiens 0 416
ENST00000495333 EEF1A1-002 retained_intron Homo_sapiens 0 584
ENST00000495704 EEF1A1P25-001 processed_pseudogene Homo_sapiens 0 1175
ENST00000503537 EEF1A1P13-001 processed_pseudogene Homo_sapiens 0 1507
ENST00000509116 RP11-553P9.1-001 processed_pseudogene Homo_sapiens 0 1284
ENST00000513637 EEF1A1P19-001 processed_pseudogene Homo_sapiens 0 1463
ENST00000514975 EEF1A1P9-001 processed_pseudogene Homo_sapiens 0 1498
ENST00000525759 CTD-2063L20.1-001 processed_pseudogene Homo_sapiens 0 477
ENST00000547505 EEF1A1P17-001 processed_pseudogene Homo_sapiens 0 1195
ENST00000554413 EEF1A1P33-001 processed_pseudogene Homo_sapiens 0 723
ENST00000559385 EEF1A1P22-001 processed_pseudogene Homo_sapiens 0 1290
ENST00000567658 EEF1A1P38-001 processed_pseudogene Homo_sapiens 0 1341
ENST00000596811 EEF1A1P7-001 processed_pseudogene Homo_sapiens 0 1260
ENST00000605239 AP000436.4-001 processed_pseudogene Homo_sapiens 0 496
ENST00000610520 EEF1A1-201 protein_coding Homo_sapiens 0 1061
ENST00000615060 EEF1A1-202 protein_coding Homo_sapiens 0 1594

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