C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: peptidase (mitochondrial processing) beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000428154 PMPCB-007 ENSG00000105819 9606 + 7:103297435-103312415 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000428154
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000428154 6.192±0.00 10.690±0.00 3.254±0.00 6.861±3.11 6.535±2.38 8.070±0.00 5.705±1.42 11.080±5.80 8.008±0.54 4.605±0.52 3.101±0.01 19.376±15.13 10.336±6.70 22.815±6.91

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005CJ CIL_0005CJ_0001 CGP 7:103099776-103329511
CIL_0001RL CIL_0001RL_0002 CGP 7:103297422-103344873

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004222 IEA metalloendopeptidase activity
GO:0006508 IEA proteolysis
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030882 Pmpcb-001 protein_coding Mus_musculus 0 1526
ENSMUST00000125693 Pmpcb-002 retained_intron Mus_musculus 0 778
ENSMUST00000150861 Pmpcb-006 retained_intron Mus_musculus 0 396

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