C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calmodulin 2 pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000428512 CALM2P2-001 ENSG00000229097 9606 + 10:70163685-70164124 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000428512
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000428512 0.114±0.00 1.234±0.00 0.105±0.00 0.416±0.07 1.404±0.00 0.529±0.00 0.109±0.02 0.729±0.00 0.188±0.00 0.612±0.10 0.021±0.00 0.676±0.33 0.092±0.02 0.398±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000PY CIL_0000PY_0002 CGP 10:70137981-70170523
CIL_0004JC CIL_0004JC_0002 CGP 10:70147289-70233911

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000040440 Calm2-001 protein_coding Mus_musculus 0 525
ENSMUST00000121087 Gm7308-001 processed_pseudogene Mus_musculus 0 512
ENSMUST00000150137 Calm2-002 retained_intron Mus_musculus 0 501
ENSMUST00000118521 Gm14480-001 processed_pseudogene Mus_musculus 0 446
ENSMUST00000143965 Calm2-003 retained_intron Mus_musculus 0 344
ENSMUST00000117133 Gm15720-001 processed_pseudogene Mus_musculus 0 335

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