C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 14480
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118521 Gm14480-001 ENSMUSG00000081308 10090 - X:10696932-10697364 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverMuscleOvaryPlacentaTestisENSMUST00000118521
Transcript ID Bladder Brain Liver Muscle Ovary Placenta Testis
ENSMUST00000118521 0.104±0.08 0.359±0.00 0.034±0.02 0.113±0.02 0.382±0.08 0.106±0.07 0.138±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005QI CIL_0005QI_0002 CGP X:10485158-10719690

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000272298 CALM2-001 protein_coding Homo_sapiens 0 514
ENST00000400429 CALM2P3-001 processed_pseudogene Homo_sapiens 0 440
ENST00000409563 CALM2-007 protein_coding Homo_sapiens 0 457
ENST00000422269 RP11-761B3.1-001 nonsense_mediated_decay Homo_sapiens 0.000000008 66
ENST00000428512 CALM2P2-001 processed_pseudogene Homo_sapiens 0 446
ENST00000430810 CALM2P4-001 processed_pseudogene Homo_sapiens 0 414
ENST00000432899 CALM2-002 nonsense_mediated_decay Homo_sapiens 0 235
ENST00000456319 CALM2-006 protein_coding Homo_sapiens 0 510
ENST00000460218 CALM2-003 retained_intron Homo_sapiens 0 510
ENST00000482532 CALM2-004 retained_intron Homo_sapiens 0 457
ENST00000484408 CALM2-009 processed_transcript Homo_sapiens 0 468
ENST00000489742 CALM2-008 processed_transcript Homo_sapiens 0 278
ENST00000585658 CALM2P1-001 processed_pseudogene Homo_sapiens 0 398

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