C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000430995 AL365331.2-001 ENSG00000213262 9606 - 1:117640812-117641639 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBreastColonHeartKidneyLungOvaryTestisENST00000430995
Transcript ID Adrenal Bladder Breast Colon Heart Kidney Lung Ovary Testis
ENST00000430995 0.044±0.00 1.058±0.00 0.196±0.17 0.139±0.00 0.013±0.00 0.332±0.28 0.141±0.00 0.096±0.10 0.087±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008A1 CIL_0008A1_0001 VISTA 1:117312950-117913675
CIL_0008HM CIL_0008HM_0001 VISTA 1:117358424-117964281
CIL_00012Q CIL_00012Q_0002 CGP 1:117605934-117929630

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000172727 Vdac2-009 protein_coding Mus_musculus 0 684
ENSMUST00000173456 Vdac2-008 protein_coding Mus_musculus 0 684
ENSMUST00000022293 Vdac2-001 protein_coding Mus_musculus 0 684
ENSMUST00000153320 Vdac2-002 protein_coding Mus_musculus 0 405
ENSMUST00000147715 Vdac2-004 processed_transcript Mus_musculus 0 200
ENSMUST00000132364 Vdac2-005 retained_intron Mus_musculus 8e-38 161
ENSMUST00000152562 Vdac2-003 protein_coding Mus_musculus 2e-28 130

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