C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: reticulon 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000432103 RTN1-009 ENSG00000139970 9606 - 14:59596005-59727713 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungPlacentaENST00000432103
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Placenta
ENST00000432103 7.608±0.00 1.902±0.00 0.383±0.00 1.676±0.00 0.736±0.00 0.105±0.00 0.410±0.00 0.085±0.00 1.041±0.00 0.715±0.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000S5 CIL_0000S5_0001 CGP 14:59504539-59870966
CIL_0005ZY CIL_0005ZY_0002 CGP 14:59595976-60063559

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000078505 Rtn1-001 protein_coding Mus_musculus 0 1419
ENSMUST00000150156 Rtn1-002 processed_transcript Mus_musculus 0 878
ENSMUST00000021497 Rtn1-201 protein_coding Mus_musculus 0 876
ENSMUST00000137990 Rtn1-003 protein_coding Mus_musculus 0 865
ENSMUST00000144181 Rtn1-004 processed_transcript Mus_musculus 0 278

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