C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: reticulon 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000150156 Rtn1-002 ENSMUSG00000021087 10090 - 12:72211752-72235739 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastLiverMuscleOvaryENSMUST00000150156
Transcript ID Breast Liver Muscle Ovary
ENSMUST00000150156 1.691±0.00 0.341±0.15 0.242±0.11 3.260±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000S5 CIL_0000S5_0002 CGP 12:72101292-72409054
CIL_0005ZY CIL_0005ZY_0003 CGP 12:72211752-72514334

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000267484 RTN1-001 protein_coding Homo_sapiens 0 878
ENST00000342503 RTN1-002 protein_coding Homo_sapiens 0 876
ENST00000395090 RTN1-003 protein_coding Homo_sapiens 0 878
ENST00000432103 RTN1-009 retained_intron Homo_sapiens 0 878
ENST00000474911 RTN1-004 retained_intron Homo_sapiens 0 878
ENST00000481205 RTN1-005 retained_intron Homo_sapiens 0 503
ENST00000490111 RTN1-006 retained_intron Homo_sapiens 0 281
ENST00000557422 RTN1-008 processed_transcript Homo_sapiens 0 303
ENST00000611068 RTN1-201 protein_coding Homo_sapiens 0 878

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