C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calmodulin 2 (phosphorylase kinase, delta)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000432899 CALM2-002 ENSG00000143933 9606 - 2:47160172-47176500 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleTestisENST00000432899
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Testis
ENST00000432899 82.959±0.00 102.781±0.00 345.931±0.00 123.678±0.00 134.683±0.00 52.686±0.00 129.231±0.00 46.199±0.00 117.001±0.00 18.571±0.00 163.368±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008D2 CIL_0008D2_0001 VISTA 2:46768636-47372293

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000040440 Calm2-001 protein_coding Mus_musculus 0 1175
ENSMUST00000143965 Calm2-003 retained_intron Mus_musculus 0 734
ENSMUST00000150137 Calm2-002 retained_intron Mus_musculus 0 283
ENSMUST00000118521 Gm14480-001 processed_pseudogene Mus_musculus 0 235
ENSMUST00000121087 Gm7308-001 processed_pseudogene Mus_musculus 0 209
ENSMUST00000117133 Gm15720-001 processed_pseudogene Mus_musculus 1e-27 128
ENSDART00000014868 calm3a-201 protein_coding Danio_rerio 0.00000000000008 82
ENSDART00000021083 calm3b-201 protein_coding Danio_rerio 0.0000001 62

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