C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | Wolf-Hirschhorn syndrome candidate 1-like 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000433384  |
WHSC1L1-003 |
ENSG00000147548 |
9606 | - |
8:38275023-38382245  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008NR | CIL_0008NR_0001 | VISTA | 8:38140056-38746180 |
| CIL_0003YZ | CIL_0003YZ_0002 | CGP | 8:38225218-38275558 |
| CIL_0008SM | CIL_0008SM_0001 | VISTA | 8:38252496-38854674 |
| CIL_0008H7 | CIL_0008H7_0001 | VISTA | 8:38253282-38854976 |
| CIL_0003Z2 | CIL_0003Z2_0002 | CGP | 8:38263130-38382272 |
| CIL_0003Z1 | CIL_0003Z1_0002 | CGP | 8:38269697-38409527 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005515 | IPI:IEA | protein binding |
| GO:0005634 | IC:IEA | nucleus |
| GO:0005694 | IEA | chromosome |
| GO:0006351 | IEA | transcription, DNA-templated |
| GO:0006355 | IEA | regulation of transcription, DNA-templated |
| GO:0008270 | IEA | zinc ion binding |
| GO:0016571 | IDA | histone methylation |
| GO:0018024 | IDA:IEA | histone-lysine N-methyltransferase activity |
| GO:0034968 | IEA | histone lysine methylation |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000139966
|
Whsc1l1-006 | protein_coding | Mus_musculus | 0 | 4409 |
|
ENSMUST00000084026
|
Whsc1l1-201 | protein_coding | Mus_musculus | 0 | 2564 |
|
ENSMUST00000142395
|
Whsc1l1-005 | protein_coding | Mus_musculus | 0 | 2564 |
|
ENSMUST00000153597
|
Whsc1l1-007 | protein_coding | Mus_musculus | 0 | 1847 |
|
ENSMUST00000146919
|
Whsc1l1-003 | protein_coding | Mus_musculus | 0 | 1788 |
|
ENSMUST00000155861
|
Whsc1l1-001 | protein_coding | Mus_musculus | 0 | 1788 |
|
ENSMUST00000136107
|
Whsc1l1-002 | retained_intron | Mus_musculus | 0 | 1759 |
|
ENSMUST00000143445
|
Whsc1l1-004 | retained_intron | Mus_musculus | 0 | 1476 |
|
ENSMUST00000129959
|
Whsc1l1-008 | retained_intron | Mus_musculus | 0 | 843 |
|
ENSDART00000138045
|
whsc1l1-001 | protein_coding | Danio_rerio | 0 | 211 |
|
ENSDART00000091115
|
whsc1l1-201 | protein_coding | Danio_rerio | 6e-32 | 145 |
