C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Wolf-Hirschhorn syndrome candidate 1-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000091115 whsc1l1-201 ENSDARG00000062765 7955 - 10:20620014-20668519 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000091115
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000091115 4.636±1.27 1.163±0.56 1.286±0.00 0.048±0.00 0.251±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003Z2 CIL_0003Z2_0001 CGP 10:20608632-20669992
CIL_0003Z1 CIL_0003Z1_0001 CGP 10:20620014-20687191

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0008168 IEA methyltransferase activity
GO:0008270 IEA zinc ion binding
GO:0016740 IEA transferase activity
GO:0018024 IEA histone-lysine N-methyltransferase activity
GO:0032259 IEA methylation
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000084026 Whsc1l1-201 protein_coding Mus_musculus 1e-31 145
ENSMUST00000136107 Whsc1l1-002 retained_intron Mus_musculus 4e-32 145
ENSMUST00000139966 Whsc1l1-006 protein_coding Mus_musculus 6e-32 145
ENSMUST00000142395 Whsc1l1-005 protein_coding Mus_musculus 1e-31 145
ENSMUST00000143445 Whsc1l1-004 retained_intron Mus_musculus 3e-32 145
ENSMUST00000146919 Whsc1l1-003 protein_coding Mus_musculus 4e-32 145
ENSMUST00000155861 Whsc1l1-001 protein_coding Mus_musculus 3e-32 145
ENST00000316985 WHSC1L1-002 protein_coding Homo_sapiens 4e-32 145
ENST00000317025 WHSC1L1-001 protein_coding Homo_sapiens 1e-31 145
ENST00000433384 WHSC1L1-003 protein_coding Homo_sapiens 6e-32 145
ENST00000527502 WHSC1L1-005 protein_coding Homo_sapiens 5e-32 145
ENST00000529223 WHSC1L1-009 protein_coding Homo_sapiens 1e-32 145
ENST00000534155 WHSC1L1-008 protein_coding Homo_sapiens 4e-25 119
ENST00000534539 WHSC1L1-010 protein_coding Homo_sapiens 0.0000000000003 79

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