C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: general transcription factor IIA, 1, 19/37kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000434192 GTF2A1-003 ENSG00000165417 9606 - 14:81180209-81221231 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastPlacentaTestisENST00000434192
Transcript ID Breast Placenta Testis
ENST00000434192 3.084±0.00 2.046±0.00 7.898±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004TT CIL_0004TT_0001 CGP 14:80954989-81221377
CIL_00087I CIL_00087I_0001 VISTA 14:81013259-81617678
CIL_0004TS CIL_0004TS_0001 CGP 14:81175452-81436465

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005672 IEA transcription factor TFIIA complex
GO:0006367 IEA transcription initiation from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000063314 Gtf2a1-002 protein_coding Mus_musculus 0 1458
ENSMUST00000021345 Gtf2a1-001 protein_coding Mus_musculus 0 1458
ENSMUST00000179295 Gm5435-201 protein_coding Mus_musculus 0 1245
ENSMUST00000121505 Gm11990-001 processed_pseudogene Mus_musculus 0 881
ENSMUST00000119994 Gm9085-001 processed_pseudogene Mus_musculus 0 728

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