C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | MMS19 nucleotide excision repair homolog (S. cerevisiae) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000434392  |
MMS19-014 |
ENSG00000155229 |
9606 | - |
10:97465865-97470140  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0005Y1 | CIL_0005Y1_0001 | CGP | 10:97446131-97498794 |
| CIL_0004VE | CIL_0004VE_0001 | CGP | 10:97458324-97571209 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005488 | IEA | binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000171755
|
Mms19-002 | retained_intron | Mus_musculus | 0 | 946 |
|
ENSMUST00000026168
|
Mms19-009 | protein_coding | Mus_musculus | 0 | 946 |
|
ENSMUST00000164776
|
Mms19-004 | nonsense_mediated_decay | Mus_musculus | 0 | 946 |
|
ENSMUST00000171561
|
Mms19-001 | protein_coding | Mus_musculus | 0 | 946 |
|
ENSMUST00000163398
|
Mms19-010 | nonsense_mediated_decay | Mus_musculus | 0 | 931 |
|
ENSMUST00000170209
|
Mms19-007 | retained_intron | Mus_musculus | 0 | 931 |
|
ENSMUST00000167927
|
Mms19-006 | nonsense_mediated_decay | Mus_musculus | 0 | 850 |
|
ENSMUST00000168484
|
Mms19-005 | nonsense_mediated_decay | Mus_musculus | 0 | 837 |
|
ENSMUST00000169775
|
Mms19-003 | nonsense_mediated_decay | Mus_musculus | 0 | 835 |
|
ENSMUST00000163287
|
Mms19-011 | protein_coding | Mus_musculus | 0 | 555 |
|
ENSMUST00000166090
|
Mms19-012 | nonsense_mediated_decay | Mus_musculus | 0 | 483 |
