C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: MMS19 (MET18 S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000166090 Mms19-012 ENSMUSG00000025159 10090 - 19:41944489-41955138 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonENSMUST00000166090
Transcript ID Adrenal Colon
ENSMUST00000166090 8.887±1.67 7.599±0.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005Y0 CIL_0005Y0_0002 CGP 19:41922980-41944095
CIL_0005Y1 CIL_0005Y1_0002 CGP 19:41933472-41981157
CIL_0004VE CIL_0004VE_0002 CGP 19:41941086-42034641

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000327238 MMS19-018 protein_coding Homo_sapiens 0 1947
ENST00000355839 MMS19-201 protein_coding Homo_sapiens 0 1947
ENST00000370782 MMS19-006 protein_coding Homo_sapiens 0 1947
ENST00000415383 MMS19-007 nonsense_mediated_decay Homo_sapiens 0 1932
ENST00000434392 MMS19-014 nonsense_mediated_decay Homo_sapiens 0 483
ENST00000434538 MMS19-020 protein_coding Homo_sapiens 0 2032
ENST00000438925 MMS19-005 protein_coding Homo_sapiens 0 1947
ENST00000480108 MMS19-016 retained_intron Homo_sapiens 0 359
ENST00000485400 MMS19-002 retained_intron Homo_sapiens 0 254
ENST00000495415 MMS19-021 retained_intron Homo_sapiens 0 885

Loading