C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004VE_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000155229-ENSG00000165886 CGP 9606 10:97458324-97571209
GeneTranscriptPositionBiotype
ENSG00000155229 (MMS19)
MMS19 nucleotide excision repair homolog (S. cerevisiae) 		ENST00000327238 (MMS19-018) 97458326-97498384 protein_coding
ENST00000355839 (MMS19-201) 97458326-97498609 protein_coding
ENST00000370782 (MMS19-006) 97458324-97498758 protein_coding
ENST00000415383 (MMS19-007) 97458324-97498388 nonsense_mediated_decay
ENST00000422685 (MMS19-010) 97470831-97498429 protein_coding
ENST00000434392 (MMS19-014) 97465865-97470140 nonsense_mediated_decay
ENST00000434538 (MMS19-020) 97458324-97467525 protein_coding
ENST00000437002 (MMS19-012) 97469095-97498410 protein_coding
ENST00000438925 (MMS19-005) 97458324-97498720 protein_coding
ENST00000439048 (MMS19-004) 97476729-97498399 nonsense_mediated_decay
ENST00000441194 (MMS19-009) 97469653-97498432 nonsense_mediated_decay
ENST00000444411 (MMS19-017) 97458324-97459741 protein_coding
ENST00000448660 (MMS19-013) 97476683-97498429 nonsense_mediated_decay
ENST00000477575 (MMS19-003) 97476917-97498447 retained_intron
ENST00000478452 (MMS19-015) 97461589-97463006 retained_intron
ENST00000480108 (MMS19-016) 97460073-97461366 retained_intron
ENST00000483626 (MMS19-008) 97469673-97498794 processed_transcript
ENST00000485400 (MMS19-002) 97458326-97460319 retained_intron
ENST00000495415 (MMS19-021) 97458324-97463982 retained_intron
ENSG00000165886 (UBTD1)
ubiquitin domain containing 1 		ENST00000370664 (UBTD1-001) 97498868-97571209 protein_coding
ENSG00000264677 (AL355490.1)
 ENST00000577864 (AL355490.1-201) 97482669-97482773 miRNA
CIL_0004VE_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025159-ENSMUSG00000025171 CGP 10090 19:41941086-42034641
GeneTranscriptPositionBiotype
ENSMUSG00000025157 (Zdhhc16)
zinc finger, DHHC domain containing 16 		ENSMUST00000026154 (Zdhhc16-201) 41933472-41944095 protein_coding
ENSMUSG00000025159 (Mms19)
MMS19 (MET18 S. cerevisiae) 		ENSMUST00000026168 (Mms19-009) 41944377-41981132 protein_coding
ENSMUST00000163287 (Mms19-011) 41944209-41969722 protein_coding
ENSMUST00000163398 (Mms19-010) 41944211-41981117 nonsense_mediated_decay
ENSMUST00000164776 (Mms19-004) 41944211-41981136 nonsense_mediated_decay
ENSMUST00000165043 (Mms19-017) 41947165-41948232 retained_intron
ENSMUST00000166090 (Mms19-012) 41944489-41955138 nonsense_mediated_decay
ENSMUST00000166517 (Mms19-016) 41949727-41951344 retained_intron
ENSMUST00000167820 (Mms19-015) 41946980-41953944 protein_coding
ENSMUST00000167927 (Mms19-006) 41941086-41981114 nonsense_mediated_decay
ENSMUST00000168484 (Mms19-005) 41953097-41981130 nonsense_mediated_decay
ENSMUST00000168737 (Mms19-014) 41954457-41955167 retained_intron
ENSMUST00000169765 (Mms19-008) 41962988-41969741 protein_coding
ENSMUST00000169775 (Mms19-003) 41947675-41981137 nonsense_mediated_decay
ENSMUST00000169779 (Mms19-018) 41944549-41945627 retained_intron
ENSMUST00000169933 (Mms19-013) 41962780-41963107 retained_intron
ENSMUST00000170209 (Mms19-007) 41944205-41964627 retained_intron
ENSMUST00000171561 (Mms19-001) 41941086-41981157 protein_coding
ENSMUST00000171755 (Mms19-002) 41946792-41981139 retained_intron
ENSMUSG00000025171 (Ubtd1)
ubiquitin domain containing 1 		ENSMUST00000026170 (Ubtd1-201) 41981763-42034641 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004VE_0001ENSG00000155229ENST00000327238ENST00000355839ENST00000370782ENST00000415383ENST00000422685ENST00000434392ENST00000434538ENST00000437002ENST00000438925ENST00000439048ENST00000441194ENST00000444411ENST00000448660ENST00000477575ENST00000478452ENST00000480108ENST00000483626ENST00000485400ENST00000495415ENSG00000165886ENST00000370664ENSG00000264677ENST00000577864CIL_0004VE_0002ENSMUSG00000025157ENSMUST00000026154ENSMUSG00000025159ENSMUST00000026168ENSMUST00000163287ENSMUST00000163398ENSMUST00000164776ENSMUST00000165043ENSMUST00000166090ENSMUST00000166517ENSMUST00000167820ENSMUST00000167927ENSMUST00000168484ENSMUST00000168737ENSMUST00000169765ENSMUST00000169775ENSMUST00000169779ENSMUST00000169933ENSMUST00000170209ENSMUST00000171561ENSMUST00000171755ENSMUSG00000025171ENSMUST00000026170
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004VE_0001ENSG00000155229ENST00000327238ENST00000355839ENST00000370782ENST00000415383ENST00000422685ENST00000434538ENST00000437002ENST00000438925ENST00000439048ENST00000441194ENST00000448660ENST00000477575ENST00000485400ENST00000495415ENSG00000165886ENST00000370664ENSG00000264677ENST00000577864CIL_0004VE_0002ENSMUSG00000025157ENSMUST00000026154ENSMUSG00000025159ENSMUST00000026168ENSMUST00000163287ENSMUST00000163398ENSMUST00000164776ENSMUST00000166090ENSMUST00000167927ENSMUST00000170209ENSMUST00000171561ENSMUST00000171755ENSMUSG00000025171ENSMUST00000026170
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000155229 ENST00000327238 N/A N/A N/A 1.241±0.00 N/A N/A 0.336±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000355839 N/A N/A N/A 1.992±0.00 N/A N/A N/A N/A N/A 1.517±0.00 N/A 5.752±5.46 2.884±0.00 14.315±11.07
ENST00000370782 4.432±0.00 2.292±0.00 N/A N/A 1.534±0.00 1.329±0.72 1.703±0.00 2.661±0.00 2.055±0.00 3.808±0.00 8.136±0.00 8.683±1.99 9.781±0.19 3.994±0.00
ENST00000415383 2.389±0.00 2.966±0.00 N/A 1.511±0.55 4.081±0.00 2.544±0.00 3.042±0.00 2.257±0.00 N/A 4.947±0.00 6.800±0.00 4.313±0.00 3.245±0.00 5.837±0.00
ENST00000422685 N/A N/A N/A N/A N/A N/A N/A 2.427±0.00 N/A N/A N/A N/A N/A N/A
ENST00000434392 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000434538 N/A 4.048±0.00 N/A 3.338±0.00 3.036±0.00 3.548±0.00 2.476±0.00 3.405±2.72 3.046±0.00 4.884±0.00 N/A 9.300±0.00 N/A 5.608±0.00
ENST00000437002 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.015±0.00 N/A N/A
ENST00000438925 N/A N/A N/A N/A N/A N/A N/A 1.995±0.00 N/A N/A N/A N/A N/A N/A
ENST00000439048 N/A N/A N/A N/A 6.714±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000441194 N/A N/A N/A 3.741±0.00 N/A 2.473±0.00 1.486±0.00 N/A 4.412±0.00 N/A 2.663±0.00 5.789±0.00 N/A N/A
ENST00000444411 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000448660 N/A N/A N/A N/A N/A N/A N/A 2.165±0.00 N/A N/A N/A N/A N/A N/A
ENST00000477575 N/A N/A 2.877±0.00 N/A 3.200±0.00 N/A 0.987±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000478452 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480108 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483626 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485400 N/A N/A N/A 2.114±0.00 N/A N/A 1.189±0.00 N/A N/A N/A N/A 3.369±0.00 N/A N/A
ENST00000495415 N/A N/A N/A N/A N/A 2.220±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000165886 ENST00000370664 11.414±0.00 8.704±0.00 0.979±0.00 4.445±3.80 7.721±7.40 4.204±3.21 4.826±4.24 6.551±6.15 3.119±2.53 10.526±10.20 5.430±1.79 7.243±7.03 6.811±3.29 23.263±9.64
ENSG00000264677 ENST00000577864 N/A 0.330±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025157 ENSMUST00000026154 10.518±2.69 18.068±0.26 11.797±2.79 16.915±9.14 17.066±0.00 15.269±5.61 8.451±0.00 13.256±2.76 11.746±4.14 19.324±0.00 3.075±0.20 23.958±10.46 15.028±5.77 8.760±3.73
ENSMUSG00000025159 ENSMUST00000026168 7.221±1.47 8.258±0.58 N/A N/A 11.386±2.05 7.731±0.42 4.167±0.89 7.898±2.30 4.993±0.98 10.841±2.15 N/A 14.120±3.53 5.386±0.86 5.772±1.48
ENSMUST00000163287 N/A N/A 4.443±0.00 2.080±0.00 8.952±0.00 N/A N/A 4.273±0.00 N/A N/A 1.600±0.00 6.378±0.00 3.297±0.00 0.964±0.00
ENSMUST00000163398 6.598±1.55 5.707±1.05 6.373±0.91 4.962±2.32 7.107±0.05 3.803±0.00 3.554±0.75 4.990±0.53 4.436±1.15 6.831±1.11 2.331±0.40 5.080±0.84 6.527±1.57 3.930±1.77
ENSMUST00000164776 N/A N/A 7.932±0.00 8.857±1.06 N/A N/A 2.153±0.00 N/A 5.166±0.97 N/A 2.152±0.61 N/A 5.421±0.72 3.574±0.12
ENSMUST00000165043 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000166090 N/A 8.887±1.67 N/A N/A N/A 7.599±0.48 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000166517 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000167820 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000167927 3.326±1.32 3.475±0.65 4.241±1.99 5.271±0.10 4.598±0.61 2.880±0.32 1.391±0.32 2.961±0.26 2.419±0.82 3.947±0.17 0.860±0.13 4.181±1.16 3.754±1.07 1.830±0.87
ENSMUST00000168484 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168737 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000169765 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000169775 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000169779 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000169933 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170209 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.263±0.00 N/A N/A
ENSMUST00000171561 N/A N/A N/A 1.086±0.00 N/A N/A N/A N/A N/A N/A 1.007±0.17 1.147±0.00 2.498±0.74 0.320±0.00
ENSMUST00000171755 N/A 7.142±1.51 N/A N/A 6.404±0.00 5.267±0.00 N/A N/A N/A N/A N/A 9.496±1.00 N/A N/A
ENSMUSG00000025171 ENSMUST00000026170 17.555±3.29 12.089±1.09 13.326±0.51 4.901±1.79 13.803±4.56 7.865±1.43 11.166±0.34 10.208±1.32 4.443±1.47 12.010±0.72 8.705±0.90 12.921±5.73 29.854±32.21 100.669±46.12

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