C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L5 pseudogene 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000434805 RPL5P4-001 ENSG00000229994 9606 + 1:35350722-35351607 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000434805
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000434805 0.079±0.00 0.122±0.00 0.976±0.00 0.247±0.22 0.448±0.34 0.917±0.89 0.219±0.12 0.118±0.08 0.933±0.00 0.439±0.33 0.061±0.00 0.210±0.17 0.101±0.00 0.086±0.05

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000071523 Gm15500-001 transcribed_processed_pseudogene Mus_musculus 0 1046
ENSMUST00000071641 Gm15500-002 processed_transcript Mus_musculus 0 1046
ENSMUST00000082223 Rpl5-001 protein_coding Mus_musculus 0 1046
ENSMUST00000119057 Rpl5-ps2-001 processed_pseudogene Mus_musculus 0 1002
ENSMUST00000121367 Rpl5-ps1-001 processed_pseudogene Mus_musculus 0 990
ENSMUST00000121088 Gm11307-001 processed_pseudogene Mus_musculus 0 725
ENSMUST00000140659 Rpl5-005 retained_intron Mus_musculus 0 457
ENSMUST00000118025 Gm15766-001 processed_pseudogene Mus_musculus 0 329
ENSMUST00000151767 Rpl5-006 retained_intron Mus_musculus 0 226

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