C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ribosomal protein L5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000140659 Rpl5-005 ENSMUSG00000058558 10090 + 5:107904114-107908050 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryTestisENSMUST00000140659
Transcript ID Ovary Testis
ENSMUST00000140659 53.845±0.00 6.773±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007CB CIL_0007CB_0003 CGP 5:107900502-107987085

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000370321 RPL5-001 protein_coding Homo_sapiens 0 544
ENST00000392009 RPL5P5-001 processed_pseudogene Homo_sapiens 0 446
ENST00000396820 RPL5P8-001 processed_pseudogene Homo_sapiens 0 355
ENST00000398869 RPL5P35-001 unprocessed_pseudogene Homo_sapiens 0 243
ENST00000425640 RPL5P6-001 processed_pseudogene Homo_sapiens 0 442
ENST00000426545 RPL5P34-001 processed_pseudogene Homo_sapiens 0 466
ENST00000434805 RPL5P4-001 processed_pseudogene Homo_sapiens 0 457
ENST00000438138 RPL5P26-001 processed_pseudogene Homo_sapiens 0 366
ENST00000448118 RPL5P9-001 processed_pseudogene Homo_sapiens 0 424
ENST00000454085 RPL5P32-001 processed_pseudogene Homo_sapiens 0 407
ENST00000457507 RP11-234N17.1-001 processed_pseudogene Homo_sapiens 0 331
ENST00000463742 RPL5P24-001 processed_pseudogene Homo_sapiens 0 427
ENST00000465511 RPL5P30-001 processed_pseudogene Homo_sapiens 0 433
ENST00000469685 RPL5P17-001 processed_pseudogene Homo_sapiens 0 390
ENST00000478870 AP000797.2-001 processed_pseudogene Homo_sapiens 0 361
ENST00000482972 RPL5P29-001 processed_pseudogene Homo_sapiens 0 403
ENST00000493817 RPL5P3-001 processed_pseudogene Homo_sapiens 0 442
ENST00000497519 RPL5-005 retained_intron Homo_sapiens 0 634
ENST00000498068 RPL5P11-001 processed_pseudogene Homo_sapiens 0 405
ENST00000600819 RP11-369G6.2-001 processed_pseudogene Homo_sapiens 0 331

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