C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L5, pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121367 Rpl5-ps1-001 ENSMUSG00000082193 10090 + 1:14865072-14865965 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainHeartKidneyLiverOvaryPlacentaTestisENSMUST00000121367
Transcript ID Adipose Bladder Brain Heart Kidney Liver Ovary Placenta Testis
ENSMUST00000121367 0.049±0.00 24.314±3.26 11.441±2.49 0.048±0.00 0.052±0.00 8.660±13.62 0.178±0.08 0.073±0.05 0.102±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003FQ CIL_0003FQ_0002 CGP 1:14753346-14918862

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000315741 RPL5-006 protein_coding Homo_sapiens 0 736
ENST00000370321 RPL5-001 protein_coding Homo_sapiens 0 1203
ENST00000392009 RPL5P5-001 processed_pseudogene Homo_sapiens 0 972
ENST00000396820 RPL5P8-001 processed_pseudogene Homo_sapiens 0 425
ENST00000398869 RPL5P35-001 unprocessed_pseudogene Homo_sapiens 0 723
ENST00000425640 RPL5P6-001 processed_pseudogene Homo_sapiens 0 1029
ENST00000426545 RPL5P34-001 processed_pseudogene Homo_sapiens 0 1092
ENST00000434805 RPL5P4-001 processed_pseudogene Homo_sapiens 0 990
ENST00000437011 RPL5P27-001 processed_pseudogene Homo_sapiens 0 697
ENST00000438138 RPL5P26-001 processed_pseudogene Homo_sapiens 0 824
ENST00000441148 RPL5P25-001 processed_pseudogene Homo_sapiens 0 869
ENST00000448118 RPL5P9-001 processed_pseudogene Homo_sapiens 0 987
ENST00000454085 RPL5P32-001 processed_pseudogene Homo_sapiens 0 889
ENST00000457507 RP11-234N17.1-001 processed_pseudogene Homo_sapiens 0 320
ENST00000460716 RPL5P1-001 processed_pseudogene Homo_sapiens 0 1077
ENST00000461952 RPL5-004 retained_intron Homo_sapiens 0 464
ENST00000463742 RPL5P24-001 processed_pseudogene Homo_sapiens 0 968
ENST00000465511 RPL5P30-001 processed_pseudogene Homo_sapiens 0 1027
ENST00000469685 RPL5P17-001 processed_pseudogene Homo_sapiens 0 896
ENST00000470843 RPL5-003 nonsense_mediated_decay Homo_sapiens 0 433
ENST00000477071 RPL5P12-001 processed_pseudogene Homo_sapiens 0 902
ENST00000478870 AP000797.2-001 processed_pseudogene Homo_sapiens 0 355
ENST00000482972 RPL5P29-001 processed_pseudogene Homo_sapiens 0 970
ENST00000487833 RPL5P33-001 processed_pseudogene Homo_sapiens 0 769
ENST00000493817 RPL5P3-001 processed_pseudogene Homo_sapiens 0 1024
ENST00000496040 RPL5P23-001 processed_pseudogene Homo_sapiens 0 885
ENST00000497519 RPL5-005 retained_intron Homo_sapiens 0 484
ENST00000498068 RPL5P11-001 processed_pseudogene Homo_sapiens 0 422
ENST00000600819 RP11-369G6.2-001 processed_pseudogene Homo_sapiens 0 640

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