C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 15766
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118025 Gm15766-001 ENSMUSG00000081023 10090 + 6:147271837-147272649 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderLiverOvaryPlacentaENSMUST00000118025
Transcript ID Bladder Liver Ovary Placenta
ENSMUST00000118025 0.011±0.00 0.009±0.00 0.069±0.02 0.032±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056O CIL_00056O_0002 CGP 6:147252101-147632612

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000315741 RPL5-006 protein_coding Homo_sapiens 0 453
ENST00000370321 RPL5-001 protein_coding Homo_sapiens 0 453
ENST00000396820 RPL5P8-001 processed_pseudogene Homo_sapiens 0 235
ENST00000398869 RPL5P35-001 unprocessed_pseudogene Homo_sapiens 3.00018e-42 176
ENST00000426545 RPL5P34-001 processed_pseudogene Homo_sapiens 0 339
ENST00000434805 RPL5P4-001 processed_pseudogene Homo_sapiens 0 329
ENST00000438138 RPL5P26-001 processed_pseudogene Homo_sapiens 0 267
ENST00000441148 RPL5P25-001 processed_pseudogene Homo_sapiens 0 342
ENST00000448118 RPL5P9-001 processed_pseudogene Homo_sapiens 0 318
ENST00000454085 RPL5P32-001 processed_pseudogene Homo_sapiens 0 298
ENST00000457507 RP11-234N17.1-001 processed_pseudogene Homo_sapiens 0 287
ENST00000460716 RPL5P1-001 processed_pseudogene Homo_sapiens 0 424
ENST00000461952 RPL5-004 retained_intron Homo_sapiens 0 292
ENST00000463742 RPL5P24-001 processed_pseudogene Homo_sapiens 0 363
ENST00000465511 RPL5P30-001 processed_pseudogene Homo_sapiens 0 418
ENST00000470843 RPL5-003 nonsense_mediated_decay Homo_sapiens 0 316
ENST00000477071 RPL5P12-001 processed_pseudogene Homo_sapiens 0 372
ENST00000482972 RPL5P29-001 processed_pseudogene Homo_sapiens 0 405
ENST00000494197 RPL5P14-001 processed_pseudogene Homo_sapiens 0 370
ENST00000496040 RPL5P23-001 processed_pseudogene Homo_sapiens 0 401
ENST00000497519 RPL5-005 retained_intron Homo_sapiens 0 388
ENST00000498068 RPL5P11-001 processed_pseudogene Homo_sapiens 0 329
ENST00000509786 CTD-2194F4.2-001 processed_pseudogene Homo_sapiens 0 254

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