C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000435130 RP11-84O12.3-001 ENSG00000224685 9606 + 1:100651947-100652267 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleTestisENST00000435130
Transcript ID Muscle Testis
ENST00000435130 0.079±0.00 0.624±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113211 Rpl36a-001 protein_coding Mus_musculus 0 311
ENSMUST00000170828 Rpl36a-004 nonsense_mediated_decay Mus_musculus 0 309
ENSMUST00000172023 Rpl36a-003 retained_intron Mus_musculus 0 309
ENSMUST00000149857 Rpl36a-005 retained_intron Mus_musculus 0 307
ENSMUST00000081987 Rpl36a-ps1-201 processed_pseudogene Mus_musculus 0 283
ENSMUST00000116105 Gm11970-001 processed_pseudogene Mus_musculus 0 281
ENSMUST00000142299 Gm13194-001 processed_pseudogene Mus_musculus 0 257
ENSMUST00000174479 Dtnb-005 protein_coding Mus_musculus 0 239
ENSMUST00000121439 Gm12936-001 processed_pseudogene Mus_musculus 9.99967e-42 172
ENSMUST00000152266 Rpl36a-002 retained_intron Mus_musculus 1e-37 159
ENSMUST00000169457 Rpl36a-006 retained_intron Mus_musculus 2e-35 152

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