C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA binding motif protein 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000435161 RBM12-006 ENSG00000244462 9606 - 20:35654921-35664934 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005FU CIL_0005FU_0001 CGP 20:35615892-35664956
CIL_0006AA CIL_0006AA_0001 CGP 20:35648925-35699359

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000138068 Rbm12-006 protein_coding Mus_musculus 0 835
ENSMUST00000131377 Rbm12-004 protein_coding Mus_musculus 0 782
ENSMUST00000059647 Rbm12-001 protein_coding Mus_musculus 0 782
ENSMUST00000128499 Rbm12-005 protein_coding Mus_musculus 0 725
ENSMUST00000109604 Rbm12-002 protein_coding Mus_musculus 0 723
ENSMUST00000132494 Gm28036-001 nonsense_mediated_decay Mus_musculus 0 723
ENSMUST00000184899 Gm28036-004 nonsense_mediated_decay Mus_musculus 0 448
ENSMUST00000159952 Gm28036-008 nonsense_mediated_decay Mus_musculus 0 368
ENSMUST00000160165 Gm28036-007 nonsense_mediated_decay Mus_musculus 0 368
ENSMUST00000162612 Gm28036-006 nonsense_mediated_decay Mus_musculus 0 368
ENSMUST00000154889 Cpne1-012 protein_coding Mus_musculus 0 364
ENSMUST00000183518 Gm28036-003 protein_coding Mus_musculus 0 364
ENSMUST00000133921 Cpne1-011 protein_coding Mus_musculus 0 250
ENSMUST00000127956 Gm28036-002 nonsense_mediated_decay Mus_musculus 2.00386e-43 180
ENSMUST00000184265 Cpne1-015 protein_coding Mus_musculus 1e-24 117

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