C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RNA binding motif protein 12
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000244462 RBM12 9606 - 20:35648925-35664956 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000359646 RBM12-003 35650142-35664888 protein_coding
  ENST00000374104 RBM12-002 35650326-35664900 protein_coding
  ENST00000374114 RBM12-001 35648925-35664916 protein_coding
  ENST00000424458 RBM12-004 35654450-35664889 protein_coding
  ENST00000431148 RBM12-005 35654893-35664956 protein_coding
  ENST00000435161 RBM12-006 35654921-35664934 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000359646ENST00000374104ENST00000374114ENST00000424458
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000359646 N/A N/A 1.855±0.00 N/A 4.497±0.00 N/A N/A 1.804±0.00 N/A 4.991±0.00 N/A 14.697±10.62 11.841±0.00 10.923±0.00
ENST00000374104 7.623±0.00 13.510±0.00 N/A 3.877±1.31 8.244±0.00 4.455±1.86 4.182±1.38 7.470±0.00 3.573±1.02 7.564±0.00 3.321±0.31 11.582±0.22 11.433±1.72 7.894±0.00
ENST00000374114 4.820±0.00 8.618±0.00 1.658±0.00 3.605±1.40 4.449±0.88 4.426±1.37 2.274±0.66 5.461±0.00 2.529±1.07 3.905±0.18 N/A 6.781±1.85 N/A 4.873±0.58
ENST00000424458 N/A N/A 9.944±0.00 12.478±0.00 18.809±0.00 16.919±0.00 10.925±0.00 N/A 21.437±0.00 15.502±0.00 7.166±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005FU CIL_0005FU_0001 CGP 20:35615892-35664956
CIL_0006AA CIL_0006AA_0001 CGP 20:35648925-35699359

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0005634 IDA nucleus
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000089824 Rbm12 RNA binding motif protein 12 protein_coding Mus_musculus

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