C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GDP-mannose pyrophosphorylase A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000435316 GMPPA-008 ENSG00000144591 9606 + 2:219498909-219505555 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderKidneyLiverLungOvaryPlacentaENST00000435316
Transcript ID Bladder Kidney Liver Lung Ovary Placenta
ENST00000435316 3.375±0.00 0.774±0.00 1.369±0.00 2.755±0.00 8.685±4.40 6.488±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000916 CIL_000916_0001 VISTA 2:219106772-219707284
CIL_0006O1 CIL_0006O1_0001 CGP 2:219434846-219506988
CIL_000415 CIL_000415_0002 CGP 2:219498867-219538772

Gene Ontology

GO IDEvidence TypeGO Description
GO:0009058 IEA biosynthetic process
GO:0016779 IEA nucleotidyltransferase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113584 Gmppa-002 protein_coding Mus_musculus 0 957
ENSMUST00000037796 Gmppa-001 protein_coding Mus_musculus 0 957
ENSMUST00000144874 Gmppa-012 protein_coding Mus_musculus 0 900
ENSMUST00000131545 Gmppa-008 protein_coding Mus_musculus 0 754
ENSMUST00000133418 Gmppa-005 protein_coding Mus_musculus 0 747
ENSMUST00000143730 Gmppa-006 protein_coding Mus_musculus 0 671
ENSMUST00000188097 Gmppa-013 nonsense_mediated_decay Mus_musculus 0 540
ENSMUST00000140287 Gmppa-007 protein_coding Mus_musculus 0 538
ENSMUST00000145166 Gmppa-003 protein_coding Mus_musculus 0 254

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