C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: GDP-mannose pyrophosphorylase A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000188097 Gmppa-013 ENSMUSG00000033021 10090 + 1:75436942-75442028 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonENSMUST00000188097
Transcript ID Adrenal Colon
ENSMUST00000188097 19.307±0.48 29.080±7.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000916 CIL_000916_0002 VISTA 1:75047166-75647630
CIL_0006O1 CIL_0006O1_0002 CGP 1:75375297-75443179
CIL_000415 CIL_000415_0003 CGP 1:75435930-75474343

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000313597 GMPPA-001 protein_coding Homo_sapiens 0 616
ENST00000341142 GMPPA-012 protein_coding Homo_sapiens 0 616
ENST00000358215 GMPPA-003 protein_coding Homo_sapiens 0 616
ENST00000373908 GMPPA-004 protein_coding Homo_sapiens 0 616
ENST00000373917 GMPPA-002 protein_coding Homo_sapiens 0 616
ENST00000435316 GMPPA-008 protein_coding Homo_sapiens 0 540
ENST00000443704 GMPPA-005 nonsense_mediated_decay Homo_sapiens 0 616
ENST00000455657 GMPPA-006 protein_coding Homo_sapiens 0 616
ENST00000480506 GMPPA-009 retained_intron Homo_sapiens 0 340
ENST00000481170 GMPPA-013 retained_intron Homo_sapiens 0 340
ENST00000622191 GMPPA-201 protein_coding Homo_sapiens 0 616

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