C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 22, member 23
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000436008 SLC22A23-002 ENSG00000137266 9606 - 6:3268962-3457022 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000436008
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000436008 2.445±0.00 1.458±0.00 1.323±0.00 2.114±0.75 0.941±0.00 1.825±0.00 1.874±0.00 1.383±0.11 0.576±0.00 3.470±2.05 2.130±0.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081I CIL_00081I_0001 VISTA 6:2946622-3549686
CIL_000823 CIL_000823_0001 VISTA 6:3049163-3652023
CIL_0003IV CIL_0003IV_0001 CGP 6:3224261-3303373
CIL_00015Z CIL_00015Z_0002 CGP 6:3231403-3457022
CIL_0003IW CIL_0003IW_0001 CGP 6:3268962-3752026

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane
GO:0022857 IEA transmembrane transporter activity
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000040336 Slc22a23-001 protein_coding Mus_musculus 0 2713
ENSMUST00000148390 Slc22a23-002 protein_coding Mus_musculus 0 2013
ENSMUST00000143353 Slc22a23-005 processed_transcript Mus_musculus 0 736
ENSMUST00000145038 Slc22a23-004 nonsense_mediated_decay Mus_musculus 0 525

Loading